Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11931481	1.00[CHB][hapmap]
rs11933932	1.00[EUR][1000 genomes]
rs11938186	1.00[EUR][1000 genomes]
rs1500503	0.83[EUR][1000 genomes]
rs1604153	1.00[CHB][hapmap];0.83[EUR][1000 genomes]
rs17002701	0.82[YRI][hapmap]
rs17002711	1.00[CHB][hapmap];1.00[EUR][1000 genomes]
rs2099872	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2903238	1.00[EUR][1000 genomes]
rs4318671	1.00[CHB][hapmap];1.00[EUR][1000 genomes]
rs58419747	1.00[EUR][1000 genomes]
rs60009608	1.00[EUR][1000 genomes]
rs60146447	1.00[EUR][1000 genomes]
rs60750805	1.00[EUR][1000 genomes]
rs60782487	1.00[EUR][1000 genomes]
rs61169633	1.00[AMR][1000 genomes]
rs61341260	1.00[EUR][1000 genomes]
rs61389038	1.00[AMR][1000 genomes]
rs72859810	1.00[AMR][1000 genomes]
rs72872063	1.00[AMR][1000 genomes]
rs7654195	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7669299	1.00[CHB][hapmap]
rs7672906	1.00[AMR][1000 genomes]
rs7684946	1.00[AMR][1000 genomes]
rs7694642	0.83[EUR][1000 genomes]
rs9761182	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829974	chr4:78240718-78415642	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv3434529	chr4:78388030-78470631	Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:78404400-78409600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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