Variant report

No.	Distal block	Cell Line	Cell type
1	chr2:58945540..58948530-chr2:58959428..58962203,2	K562	blood:
2	chr2:58945242..58949329-chr2:58957340..58962879,5	K562	blood:
3	chr2:58945888..58951187-chr2:58955969..58958921,4	K562	blood:
4	chr2:58941880..58945006-chr2:58945686..58948825,3	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10176567	0.90[EUR][1000 genomes]
rs10184424	0.92[EUR][1000 genomes]
rs10187702	0.92[EUR][1000 genomes]
rs10207788	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10211534	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12618115	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12619538	0.84[ASN][1000 genomes]
rs13416859	0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13417036	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13428870	0.81[ASN][1000 genomes]
rs17049709	0.91[ASN][1000 genomes]
rs17049712	0.81[ASN][1000 genomes]
rs17049722	0.86[ASN][1000 genomes]
rs17615494	0.82[ASN][1000 genomes]
rs1796435	0.86[ASN][1000 genomes]
rs2540324	0.86[ASN][1000 genomes]
rs2540325	0.86[ASN][1000 genomes]
rs2708146	0.81[ASN][1000 genomes]
rs55767040	0.82[ASN][1000 genomes]
rs62142335	0.84[EUR][1000 genomes]
rs62142340	0.92[ASN][1000 genomes]
rs62142342	0.91[ASN][1000 genomes]
rs6722165	0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6741951	0.81[ASN][1000 genomes]
rs6753110	0.91[EUR][1000 genomes]
rs72961970	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431180	chr2:58857542-59178687	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:58941200-58954600	Weak transcription	Primary hematopoietic stem cells	blood
2	chr2:58943400-58948400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr2:58943800-58950200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr2:58946600-58948600	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr2:58946600-58949200	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr2:58946800-58947800	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr2:58946800-58948200	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr2:58947000-58948200	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr2:58947000-58948400	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr2:58947400-58948000	Enhancers	K562	blood
11	chr2:58947600-58947800	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell

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