Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10885932	0.84[ASN][1000 genomes]
rs10885934	0.83[ASN][1000 genomes]
rs10885935	0.83[ASN][1000 genomes]
rs11197666	0.82[AMR][1000 genomes]
rs11197681	0.84[ASN][1000 genomes]
rs12415255	0.84[ASN][1000 genomes]
rs12569633	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs12571391	0.86[AMR][1000 genomes]
rs17094710	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17094717	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17094724	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17094739	0.84[ASN][1000 genomes]
rs17094741	0.84[ASN][1000 genomes]
rs17094744	0.84[ASN][1000 genomes]
rs17094748	0.84[ASN][1000 genomes]
rs17107883	0.96[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs57823536	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58682643	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs62619836	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73375799	0.82[AMR][1000 genomes]
rs7915872	0.91[AMR][1000 genomes]
rs7916447	0.84[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832001	chr10:118138370-118315059	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118176600-118179800	Enhancers	NHEK	skin
2	chr10:118176800-118182000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr10:118177200-118179800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr10:118177600-118182600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr10:118178400-118179600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr10:118178600-118179800	Enhancers	HMEC	breast
7	chr10:118179000-118180800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr10:118179400-118181000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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