Variant report

Variant	rs17095657
Chromosome Location	chr10:118836812-118836813
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs17095423	1.00[EUR][1000 genomes]
rs17095425	1.00[EUR][1000 genomes]
rs17095640	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17095668	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17095683	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57389221	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57983429	1.00[EUR][1000 genomes]
rs60202099	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6585421	1.00[EUR][1000 genomes]
rs73385275	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832002	chr10:118797070-119005840	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118834800-118837600	Weak transcription	A549	lung
2	chr10:118835000-118837800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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