Variant report

Variant	rs6585421
Chromosome Location	chr10:118644963-118644964
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:118638561..118640505-chr10:118642670..118645374,2	K562	blood:
2	chr10:118636634..118640505-chr10:118641692..118646395,4	K562	blood:

rs_ID	r²[population]
rs11197849	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12251703	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12253831	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12254776	1.00[AMR][1000 genomes]
rs12265399	1.00[AMR][1000 genomes]
rs17095423	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17095425	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17095640	1.00[EUR][1000 genomes]
rs17095657	1.00[EUR][1000 genomes]
rs17095668	1.00[EUR][1000 genomes]
rs17095683	1.00[EUR][1000 genomes]
rs3981230	0.95[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs57389221	1.00[EUR][1000 genomes]
rs57983429	1.00[EUR][1000 genomes]
rs60202099	1.00[EUR][1000 genomes]
rs73385275	1.00[EUR][1000 genomes]
rs7900137	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7904582	1.00[AMR][1000 genomes]

Chromatin state (count:53 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118636600-118647800	Weak transcription	Liver	Liver
2	chr10:118637200-118648400	Weak transcription	Brain Substantia Nigra	brain
3	chr10:118637200-118658800	Weak transcription	Pancreas	Pancrea
4	chr10:118637600-118670400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr10:118637800-118645000	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr10:118637800-118648400	Weak transcription	Brain Angular Gyrus	brain
7	chr10:118638000-118645000	Weak transcription	Brain Hippocampus Middle	brain
8	chr10:118638600-118648400	Weak transcription	Fetal Intestine Large	intestine
9	chr10:118639000-118666600	Weak transcription	Fetal Intestine Small	intestine
10	chr10:118639400-118645200	Weak transcription	Brain Germinal Matrix	brain
11	chr10:118639400-118646400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr10:118639600-118648000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr10:118639800-118645200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr10:118639800-118645800	Weak transcription	Hela-S3	cervix
15	chr10:118640400-118645800	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr10:118640400-118645800	Weak transcription	HUES6 Cell Line	embryonic stem cell
17	chr10:118640400-118646400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr10:118640400-118647800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr10:118640400-118649600	Strong transcription	Monocytes-CD14+_RO01746	blood
20	chr10:118640600-118645800	Weak transcription	HUES64 Cell Line	embryonic stem cell
21	chr10:118640600-118645800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
22	chr10:118640600-118646000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
23	chr10:118640600-118647800	Weak transcription	Rectal Mucosa Donor 31	rectum
24	chr10:118640800-118645200	Weak transcription	NHEK	skin
25	chr10:118640800-118646000	Weak transcription	Brain Cingulate Gyrus	brain
26	chr10:118640800-118646400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr10:118640800-118647600	Weak transcription	Muscle Satellite Cultured Cells	--
28	chr10:118640800-118647600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr10:118640800-118651600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr10:118641000-118645800	Weak transcription	HSMMtube	muscle
31	chr10:118641000-118647200	Weak transcription	HSMM	muscle
32	chr10:118641000-118647600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
33	chr10:118641000-118650600	Weak transcription	Adipose Nuclei	Adipose
34	chr10:118641400-118648000	Weak transcription	Lung	lung
35	chr10:118641800-118647600	Weak transcription	NH-A	brain
36	chr10:118641800-118648000	Weak transcription	Esophagus	oesophagus
37	chr10:118641800-118648000	Weak transcription	Stomach Mucosa	stomach
38	chr10:118641800-118658800	Weak transcription	K562	blood
39	chr10:118641800-118665200	Weak transcription	HepG2	liver
40	chr10:118641800-118665400	Weak transcription	Fetal Brain Female	brain
41	chr10:118642200-118647000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr10:118642200-118649200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr10:118642400-118647800	Weak transcription	Rectal Mucosa Donor 29	rectum
44	chr10:118642600-118652800	Weak transcription	Fetal Brain Male	brain
45	chr10:118642600-118670400	Weak transcription	Sigmoid Colon	Sigmoid Colon
46	chr10:118642800-118646000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
47	chr10:118643000-118647200	Strong transcription	A549	lung
48	chr10:118643000-118650200	Strong transcription	Primary monocytes fromperipheralblood	blood
49	chr10:118643400-118650800	Weak transcription	Aorta	Aorta
50	chr10:118643600-118649800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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