The 2.0 version of rSNPBase

Variant report

Variant rs17095425
Chromosome Location chr10:118661668-118661669
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:118637600-118670400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr10:118639000-118666600 Weak transcription Fetal Intestine Small intestine
3 chr10:118641800-118665200 Weak transcription HepG2 liver
4 chr10:118641800-118665400 Weak transcription Fetal Brain Female brain
5 chr10:118642600-118670400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr10:118645400-118673200 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr10:118647400-118680000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr10:118648800-118698600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr10:118649200-118670400 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr10:118649200-118681200 Weak transcription Stomach Mucosa stomach
11 chr10:118649200-118698400 Weak transcription Esophagus oesophagus
12 chr10:118649400-118665000 Weak transcription NHEK skin
13 chr10:118649400-118665200 Weak transcription Hela-S3 cervix
14 chr10:118651600-118665200 Weak transcription Adipose Nuclei Adipose
15 chr10:118651800-118665800 Weak transcription NH-A brain
16 chr10:118651800-118670600 Weak transcription HSMMtube muscle
17 chr10:118651800-118689800 Weak transcription HSMM muscle
18 chr10:118651800-118706600 Weak transcription Muscle Satellite Cultured Cells --
19 chr10:118652000-118671600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr10:118652000-118736200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr10:118653000-118679600 Weak transcription H1 Cell Line embryonic stem cell
22 chr10:118653200-118663400 Weak transcription Fetal Brain Male brain
23 chr10:118653200-118665200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr10:118653200-118666600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr10:118653200-118672600 Weak transcription Gastric stomach
26 chr10:118653200-118679200 Weak transcription Duodenum Mucosa Duodenum
27 chr10:118653200-118684600 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr10:118653200-118706800 Weak transcription H9 Cell Line embryonic stem cell
29 chr10:118653400-118667200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr10:118653400-118707600 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr10:118654000-118664000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr10:118654000-118665800 Weak transcription Brain Cingulate Gyrus brain
33 chr10:118654400-118677200 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr10:118654400-118692200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr10:118655000-118663400 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr10:118655000-118692400 Strong transcription Monocytes-CD14+_RO01746 blood
37 chr10:118655800-118671200 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr10:118656600-118663800 Strong transcription Primary monocytes fromperipheralblood blood
39 chr10:118657800-118673600 Weak transcription Fetal Muscle Leg muscle
40 chr10:118658600-118661800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr10:118658800-118662600 Strong transcription Brain Hippocampus Middle brain
42 chr10:118658800-118662800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr10:118658800-118663200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr10:118658800-118668600 Strong transcription Liver Liver
45 chr10:118659000-118663800 Strong transcription Fetal Intestine Large intestine
46 chr10:118659000-118667000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr10:118659000-118671600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr10:118659000-118671800 Weak transcription Lung lung
49 chr10:118659200-118665400 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr10:118659200-118666600 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015