Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1004477	1.00[CEU][hapmap]
rs10145775	1.00[CEU][hapmap]
rs17115503	1.00[CEU][hapmap]
rs17115530	1.00[CEU][hapmap]
rs17115684	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs17115708	1.00[CEU][hapmap]
rs17115950	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs17116023	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs17116029	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs17116069	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs17116212	1.00[CEU][hapmap]
rs17116237	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17116276	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17116292	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17116396	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2238178	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2238190	1.00[CEU][hapmap]
rs2239211	1.00[CEU][hapmap]
rs3784046	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs45601334	1.00[EUR][1000 genomes]
rs56884598	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59189869	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59884363	1.00[EUR][1000 genomes]
rs61303255	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs740536	1.00[CEU][hapmap]
rs8022670	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv948800	chr14:72462557-73150701	Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72949400-72962600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr14:72956600-72980400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr14:72956800-72962200	Weak transcription	Adipose Nuclei	Adipose
4	chr14:72961000-72963200	Strong transcription	Cortex derived primary cultured neurospheres	brain
5	chr14:72961200-72962600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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