The 2.0 version of rSNPBase

Variant report

Variant rs17127829
Chromosome Location chr14:55198560-55198561
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55165800-55239200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr14:55170200-55203800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr14:55170400-55203400 Weak transcription NHEK skin
4 chr14:55179600-55201600 Weak transcription Fetal Muscle Trunk muscle
5 chr14:55186400-55205000 Weak transcription Lung lung
6 chr14:55193400-55215600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr14:55193600-55200600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr14:55193600-55230400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr14:55195200-55203400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr14:55196000-55205000 Weak transcription Spleen Spleen
11 chr14:55197200-55198600 Enhancers Brain Hippocampus Middle brain
12 chr14:55197200-55198800 Enhancers Skeletal Muscle Male skeletal muscle
13 chr14:55197200-55200600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr14:55197200-55200800 Weak transcription Right Ventricle heart
15 chr14:55197200-55203200 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr14:55197200-55203400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr14:55197200-55228200 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr14:55197400-55200000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr14:55197400-55200800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr14:55197400-55200800 Weak transcription Fetal Muscle Leg muscle
21 chr14:55197400-55200800 Weak transcription Right Atrium heart
22 chr14:55197400-55202200 Weak transcription HepG2 liver
23 chr14:55197400-55203000 Weak transcription Left Ventricle heart
24 chr14:55197400-55203800 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr14:55197400-55204400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr14:55197400-55204800 Weak transcription Brain Anterior Caudate brain
27 chr14:55197400-55204800 Weak transcription Fetal Intestine Large intestine
28 chr14:55197400-55204800 Weak transcription Pancreas Pancrea
29 chr14:55197400-55204800 Weak transcription HUVEC blood vessel
30 chr14:55197400-55205000 Weak transcription Psoas Muscle Psoas
31 chr14:55197400-55211800 Weak transcription Gastric stomach
32 chr14:55197400-55215400 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr14:55197400-55220800 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr14:55197600-55198600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr14:55197600-55201000 Enhancers K562 blood
36 chr14:55197600-55203800 Weak transcription HSMM muscle
37 chr14:55197600-55204400 Weak transcription Brain Cingulate Gyrus brain
38 chr14:55197600-55206000 Weak transcription A549 lung
39 chr14:55197600-55216000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr14:55197800-55198800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr14:55197800-55198800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr14:55197800-55201000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr14:55197800-55201000 Weak transcription Aorta Aorta
44 chr14:55197800-55201600 Weak transcription HSMMtube muscle
45 chr14:55197800-55234200 Weak transcription Primary B cells from cord blood blood
46 chr14:55198000-55198600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr14:55198000-55199600 Weak transcription Fetal Heart heart
48 chr14:55198000-55199800 Enhancers NHDF-Ad bronchial
49 chr14:55198000-55200800 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr14:55198000-55200800 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015