The 2.0 version of rSNPBase

Variant report

Variant rs74049561
Chromosome Location chr14:55155038-55155039
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55120000-55179400 Weak transcription Fetal Intestine Small intestine
2 chr14:55141200-55157400 Weak transcription HepG2 liver
3 chr14:55144400-55157600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr14:55147600-55155200 Enhancers Left Ventricle heart
5 chr14:55148400-55155400 Enhancers NHLF lung
6 chr14:55148800-55155200 Enhancers Right Ventricle heart
7 chr14:55149000-55155200 Enhancers Psoas Muscle Psoas
8 chr14:55149200-55157600 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr14:55149600-55158000 Weak transcription K562 blood
10 chr14:55150000-55155400 Enhancers Colon Smooth Muscle Colon
11 chr14:55150800-55155200 Enhancers Brain Cingulate Gyrus brain
12 chr14:55151600-55157400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr14:55151600-55157800 Weak transcription Fetal Muscle Trunk muscle
14 chr14:55151800-55157600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr14:55151800-55165200 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr14:55152200-55157800 Weak transcription Placenta Amnion Placenta Amnion
17 chr14:55152400-55157600 Weak transcription Spleen Spleen
18 chr14:55152800-55155200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr14:55152800-55157600 Weak transcription H1 Cell Line embryonic stem cell
20 chr14:55152800-55157600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr14:55152800-55157800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr14:55152800-55178400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr14:55153000-55155200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr14:55153000-55155200 Enhancers Rectal Smooth Muscle rectum
25 chr14:55153000-55155200 Enhancers GM12878-XiMat blood
26 chr14:55153000-55155200 Enhancers HSMM muscle
27 chr14:55153000-55157400 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr14:55153000-55157600 Weak transcription Lung lung
29 chr14:55153000-55157800 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr14:55153000-55157800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr14:55153000-55174600 Weak transcription Colonic Mucosa Colon
32 chr14:55153000-55197000 Weak transcription H9 Cell Line embryonic stem cell
33 chr14:55153200-55161400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr14:55153400-55158000 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr14:55153400-55158400 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr14:55153400-55158600 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr14:55153600-55161400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr14:55153600-55161600 Weak transcription NHEK skin
39 chr14:55153800-55155600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr14:55153800-55156600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr14:55153800-55158600 Weak transcription Fetal Stomach stomach
42 chr14:55153800-55163000 Weak transcription HMEC breast
43 chr14:55154000-55155400 Enhancers HSMMtube muscle
44 chr14:55154000-55155600 Enhancers Fetal Heart heart
45 chr14:55154200-55155600 Enhancers Stomach Smooth Muscle stomach
46 chr14:55154200-55158000 Weak transcription Brain Substantia Nigra brain
47 chr14:55154200-55158600 Weak transcription Osteobl bone
48 chr14:55154200-55161200 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr14:55154200-55165000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr14:55154400-55156200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015