The 2.0 version of rSNPBase

Variant report

Variant rs17141268
Chromosome Location chr6:5775675-5775676
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5753000-5786000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr6:5764800-5776000 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr6:5765000-5776600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr6:5765200-5777000 Weak transcription NHLF lung
5 chr6:5765200-5778800 Weak transcription Muscle Satellite Cultured Cells --
6 chr6:5765400-5776000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr6:5765400-5782200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr6:5765600-5775800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr6:5765600-5782800 Weak transcription Gastric stomach
10 chr6:5765600-5783000 Weak transcription Esophagus oesophagus
11 chr6:5766000-5776200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr6:5766000-5777200 Weak transcription Lung lung
13 chr6:5766000-5783400 Weak transcription Brain Hippocampus Middle brain
14 chr6:5766000-5783400 Weak transcription Right Atrium heart
15 chr6:5767000-5776000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr6:5767000-5782200 Weak transcription Fetal Heart heart
17 chr6:5767800-5781600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr6:5768200-5782400 Weak transcription Duodenum Mucosa Duodenum
19 chr6:5768400-5776200 Weak transcription Liver Liver
20 chr6:5769400-5781400 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr6:5770000-5778000 Weak transcription GM12878-XiMat blood
22 chr6:5770000-5783000 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr6:5770200-5776200 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr6:5770200-5782800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr6:5770200-5783000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr6:5770400-5776800 Strong transcription Fetal Intestine Small intestine
27 chr6:5770400-5782400 Weak transcription Right Ventricle heart
28 chr6:5770600-5782200 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr6:5770800-5782000 Weak transcription Fetal Intestine Large intestine
30 chr6:5771000-5776400 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr6:5771000-5777400 Strong transcription Fetal Stomach stomach
32 chr6:5771000-5779600 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr6:5771200-5776800 Strong transcription Primary T cells from cord blood blood
34 chr6:5771400-5776000 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr6:5771400-5781000 Weak transcription Adipose Nuclei Adipose
36 chr6:5771600-5782400 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr6:5771600-5782600 Weak transcription Primary monocytes fromperipheralblood blood
38 chr6:5771800-5776000 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr6:5772000-5782600 Weak transcription Colonic Mucosa Colon
40 chr6:5772200-5783200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr6:5772400-5782800 Weak transcription Stomach Smooth Muscle stomach
42 chr6:5772600-5776800 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr6:5772600-5781800 Weak transcription Left Ventricle heart
44 chr6:5772600-5782800 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr6:5772800-5786800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr6:5773400-5776400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr6:5773400-5778800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr6:5773400-5782600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr6:5773600-5776800 Weak transcription Fetal Brain Male brain
50 chr6:5773800-5778400 Weak transcription Primary B cells from cord blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015