The 2.0 version of rSNPBase

Variant report

Variant rs17151841
Chromosome Location chr11:57089261-57089262
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:57079200-57091400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr11:57079400-57089600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr11:57079400-57091400 Weak transcription Primary B cells from cord blood blood
4 chr11:57079600-57089400 Weak transcription GM12878-XiMat blood
5 chr11:57079600-57090800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr11:57079800-57089400 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr11:57079800-57090400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr11:57083800-57090800 Weak transcription Primary T cells fromperipheralblood blood
9 chr11:57083800-57090800 Weak transcription Primary hematopoietic stem cells blood
10 chr11:57083800-57091400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr11:57084800-57090600 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr11:57085000-57091000 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr11:57085400-57090600 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr11:57085400-57091200 Weak transcription Primary B cells from peripheral blood blood
15 chr11:57086000-57091000 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr11:57086200-57091200 Weak transcription Primary T cells from cord blood blood
17 chr11:57087400-57089400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr11:57088200-57089600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr11:57088200-57089800 Flanking Active TSS Adipose Nuclei Adipose
20 chr11:57088200-57090800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr11:57088200-57090800 Enhancers Sigmoid Colon Sigmoid Colon
22 chr11:57088200-57091600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr11:57088400-57089400 Flanking Active TSS HMEC breast
24 chr11:57088400-57089400 Transcr. at gene 5' and 3' NHLF lung
25 chr11:57088400-57089600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
26 chr11:57088400-57089600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr11:57088400-57089600 Enhancers Fetal Kidney kidney
28 chr11:57088400-57089600 Enhancers Small Intestine intestine
29 chr11:57088600-57089400 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
30 chr11:57088600-57089400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
31 chr11:57088600-57089400 Weak transcription Brain Germinal Matrix brain
32 chr11:57088600-57089800 Flanking Active TSS NHDF-Ad bronchial
33 chr11:57088600-57090000 Flanking Active TSS Liver Liver
34 chr11:57088600-57091000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr11:57088800-57089400 Enhancers ES-I3 Cell Line embryonic stem cell
36 chr11:57088800-57089400 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
37 chr11:57088800-57089400 Flanking Active TSS Pancreas Pancrea
38 chr11:57088800-57089400 Flanking Active TSS A549 lung
39 chr11:57088800-57089600 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
40 chr11:57088800-57089600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr11:57088800-57089600 Genic enhancers iPS-18 Cell Line embryonic stem cell
42 chr11:57088800-57089600 Genic enhancers iPS-20b Cell Line embryonic stem cell
43 chr11:57088800-57089600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr11:57088800-57089600 Flanking Active TSS Placenta Amnion Placenta Amnion
45 chr11:57088800-57089800 Active TSS Esophagus oesophagus
46 chr11:57088800-57089800 Flanking Active TSS Rectal Smooth Muscle rectum
47 chr11:57088800-57090000 Flanking Active TSS Colonic Mucosa Colon
48 chr11:57088800-57090000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
49 chr11:57088800-57090000 Flanking Active TSS Stomach Mucosa stomach
50 chr11:57088800-57090200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015