Variant report

Variant	rs17154976
Chromosome Location	chr10:44537960-44537961
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10508878	0.83[AFR][1000 genomes]
rs1388977	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs169162	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17383514	1.00[EUR][1000 genomes]
rs268288	0.83[AMR][1000 genomes]
rs268290	0.88[AMR][1000 genomes]
rs268291	0.83[AMR][1000 genomes]
rs268295	0.83[AMR][1000 genomes]
rs268306	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs268310	0.83[AMR][1000 genomes]
rs268315	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs268316	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs268318	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs268320	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs268324	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs268329	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs268330	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4948813	0.82[AFR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44535400-44541400	Weak transcription	Pancreas	Pancrea
2	chr10:44535800-44539200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr10:44536400-44539600	Weak transcription	Osteobl	bone
4	chr10:44537200-44538200	Enhancers	iPS-20b Cell Line	embryonic stem cell
5	chr10:44537200-44538400	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr10:44537400-44538000	Enhancers	H1 Cell Line	embryonic stem cell
7	chr10:44537400-44538000	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr10:44537400-44538000	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr10:44537400-44538000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr10:44537400-44538200	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr10:44537600-44538200	Enhancers	H9 Cell Line	embryonic stem cell
12	chr10:44537600-44538200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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