Variant report

Variant	rs268330
Chromosome Location	chr10:44549754-44549755
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1388977	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs169162	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17154976	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17383514	0.90[EUR][1000 genomes]
rs268288	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs268290	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs268291	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs268292	0.86[EUR][1000 genomes]
rs268295	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs268306	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs268310	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs268315	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs268316	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs268318	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs268320	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs268324	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs268329	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44541200-44549800	Weak transcription	Left Ventricle	heart
2	chr10:44542400-44552800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr10:44543200-44552400	Weak transcription	Gastric	stomach
4	chr10:44547400-44552400	Weak transcription	Ovary	ovary
5	chr10:44548200-44552800	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr10:44548600-44551800	Weak transcription	Pancreas	Pancrea
7	chr10:44549400-44553400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr10:44549600-44555800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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