Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44626321..44629935-chr10:44630488..44633644,3	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1388977	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17154976	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17383514	0.81[EUR][1000 genomes]
rs2146808	1.00[CEU][hapmap]
rs268288	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs268290	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs268291	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs268292	0.95[EUR][1000 genomes]
rs268295	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs268306	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs268310	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs268315	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs268316	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs268318	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs268320	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs268324	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs268329	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs268330	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2760672	1.00[CEU][hapmap]
rs702363	1.00[CEU][hapmap]
rs746141	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs800316	1.00[CEU][hapmap]
rs800318	1.00[CEU][hapmap]
rs800320	1.00[CEU][hapmap]
rs808972	1.00[CEU][hapmap]
rs809601	1.00[CEU][hapmap]
rs900329	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038511	chr10:44596885-44870030	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44622800-44628000	Weak transcription	NHDF-Ad	bronchial
2	chr10:44626600-44628200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr10:44627400-44628400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr10:44627600-44628200	Enhancers	HepG2	liver
5	chr10:44627600-44628800	Enhancers	Adipose Nuclei	Adipose
6	chr10:44627800-44628000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr10:44627800-44628200	Enhancers	Osteobl	bone
8	chr10:44627800-44628400	Enhancers	Right Atrium	heart
9	chr10:44627800-44628400	Enhancers	Skeletal Muscle Male	skeletal muscle
10	chr10:44627800-44628400	Enhancers	Skeletal Muscle Female	skeletal muscle
11	chr10:44627800-44628600	Enhancers	Left Ventricle	heart
12	chr10:44627800-44629200	Enhancers	Pancreas	Pancrea

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