Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10230498	1.00[CHB][hapmap]
rs10262422	1.00[CHB][hapmap]
rs10271321	1.00[CHB][hapmap]
rs10500191	1.00[CHB][hapmap]
rs10500192	1.00[CHB][hapmap]
rs1525268	1.00[CHB][hapmap];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17226520	1.00[CHB][hapmap]
rs17417154	1.00[CHB][hapmap]
rs17417231	1.00[CHB][hapmap]
rs17508203	1.00[CHB][hapmap]
rs17508434	1.00[CHB][hapmap]
rs17824362	0.83[CEU][hapmap];1.00[CHB][hapmap]
rs17824644	1.00[CHB][hapmap];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17824941	1.00[CHB][hapmap]
rs2140811	1.00[CHB][hapmap]
rs2373179	1.00[CHB][hapmap]
rs2373180	1.00[CHB][hapmap]
rs2373182	1.00[CHB][hapmap]
rs2373183	1.00[CHB][hapmap]
rs4392814	1.00[CHB][hapmap]
rs4632977	1.00[CHB][hapmap]
rs7800992	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933973	chr7:147438206-147549993	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
2	nsv889397	chr7:147471710-147585819	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147493600-147494400	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr7:147494000-147494400	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr7:147494000-147494400	Weak transcription	Brain Substantia Nigra	brain

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