Variant report

Variant	rs2373179
Chromosome Location	chr7:147436377-147436378
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:147404762..147407005-chr7:147435250..147437338,2	K562	blood:

Extended variants
information (count: 93 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:93)

rs_ID	r²[population]
rs10085579	0.82[YRI][hapmap];0.80[AMR][1000 genomes]
rs10229178	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs10230498	0.94[CEU][hapmap];1.00[CHB][hapmap]
rs10262422	0.88[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes]
rs10265547	0.82[YRI][hapmap];0.81[AMR][1000 genomes]
rs10271321	0.94[CEU][hapmap];1.00[CHB][hapmap]
rs10500191	0.89[CEU][hapmap];1.00[CHB][hapmap]
rs10500192	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10952708	0.99[EUR][1000 genomes]
rs10952711	0.89[CEU][hapmap];0.95[YRI][hapmap]
rs1101041	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11766799	0.83[CEU][hapmap];0.95[YRI][hapmap];0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12530955	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12530977	0.89[ASN][1000 genomes]
rs12531094	0.82[JPT][hapmap]
rs12531829	0.89[ASN][1000 genomes]
rs12531831	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12532190	0.89[ASN][1000 genomes]
rs12532660	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12532724	0.89[ASN][1000 genomes]
rs12533614	0.89[ASN][1000 genomes]
rs12534237	1.00[JPT][hapmap]
rs12534449	0.89[ASN][1000 genomes]
rs12535317	0.89[ASN][1000 genomes]
rs12535323	0.89[ASN][1000 genomes]
rs12536417	0.82[JPT][hapmap]
rs12536848	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12538275	0.89[ASN][1000 genomes]
rs12538925	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12539340	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12540410	0.89[ASN][1000 genomes]
rs12540754	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12540757	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12666318	0.89[CEU][hapmap];0.95[YRI][hapmap]
rs12703972	1.00[YRI][hapmap]
rs12703973	0.84[JPT][hapmap];0.95[YRI][hapmap]
rs13236705	1.00[YRI][hapmap]
rs1357902	0.82[CEU][hapmap];0.91[EUR][1000 genomes]
rs1525252	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs1525259	1.00[YRI][hapmap]
rs1525260	1.00[JPT][hapmap]
rs1525261	1.00[JPT][hapmap]
rs1525262	1.00[JPT][hapmap]
rs1525263	1.00[JPT][hapmap]
rs1525264	0.89[ASN][1000 genomes]
rs1525265	0.89[ASN][1000 genomes]
rs1525266	0.89[ASN][1000 genomes]
rs1525268	1.00[CHB][hapmap]
rs1638048	1.00[JPT][hapmap]
rs17170636	1.00[JPT][hapmap]
rs17170655	0.89[ASN][1000 genomes]
rs17170668	1.00[JPT][hapmap]
rs17226275	1.00[CHB][hapmap]
rs17226520	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs17417154	0.87[CEU][hapmap];1.00[CHB][hapmap]
rs17417231	0.87[CEU][hapmap];1.00[CHB][hapmap]
rs17508203	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17508434	0.83[CEU][hapmap];1.00[CHB][hapmap]
rs17823834	0.81[CEU][hapmap];0.91[EUR][1000 genomes]
rs17824362	1.00[CHB][hapmap]
rs17824644	1.00[CHB][hapmap]
rs17824941	1.00[CHB][hapmap]
rs1990251	1.00[JPT][hapmap]
rs2140811	0.87[CEU][hapmap];1.00[CHB][hapmap];0.95[EUR][1000 genomes]
rs2373180	0.83[CEU][hapmap];1.00[CHB][hapmap]
rs2373182	0.83[CEU][hapmap];1.00[CHB][hapmap]
rs2373183	0.88[CEU][hapmap];1.00[CHB][hapmap]
rs2888516	1.00[CEU][hapmap];0.99[EUR][1000 genomes]
rs4392814	0.87[CEU][hapmap];1.00[CHB][hapmap];0.95[EUR][1000 genomes]
rs4632977	0.83[CEU][hapmap];1.00[CHB][hapmap]
rs4725746	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs58710526	0.89[ASN][1000 genomes]
rs6947112	1.00[JPT][hapmap]
rs6953679	0.94[CEU][hapmap];0.97[EUR][1000 genomes]
rs6955939	0.89[CEU][hapmap];1.00[YRI][hapmap]
rs6961273	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6965796	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs700319	0.95[YRI][hapmap]
rs700320	0.95[YRI][hapmap];0.81[AFR][1000 genomes]
rs7457261	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs7791979	0.82[CEU][hapmap]
rs851649	0.80[CEU][hapmap];0.83[YRI][hapmap]
rs851650	0.87[YRI][hapmap]
rs851653	0.94[CEU][hapmap];0.90[YRI][hapmap];0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs851654	0.87[CEU][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs851655	0.80[AMR][1000 genomes]
rs851674	0.95[YRI][hapmap]
rs851681	0.82[YRI][hapmap]
rs851683	1.00[JPT][hapmap]
rs851685	0.85[JPT][hapmap]
rs851735	1.00[JPT][hapmap]
rs954112	0.89[CEU][hapmap];0.97[EUR][1000 genomes]
rs954113	1.00[JPT][hapmap];0.89[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147436000-147437800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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