Variant report
| Variant | rs851735 |
|---|---|
| Chromosome Location | chr7:147381782-147381783 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:36)
| rs_ID | r2[population] |
|---|---|
| rs10500192 | 1.00[JPT][hapmap] |
| rs1101047 | 0.93[YRI][hapmap] |
| rs12530955 | 1.00[JPT][hapmap] |
| rs12531094 | 0.82[JPT][hapmap] |
| rs12531831 | 1.00[JPT][hapmap] |
| rs12532660 | 1.00[JPT][hapmap] |
| rs12534237 | 1.00[JPT][hapmap] |
| rs12536417 | 0.82[JPT][hapmap] |
| rs12536848 | 1.00[JPT][hapmap] |
| rs12538925 | 1.00[JPT][hapmap] |
| rs12539340 | 1.00[JPT][hapmap] |
| rs12540754 | 1.00[JPT][hapmap] |
| rs12540757 | 1.00[JPT][hapmap] |
| rs12703973 | 0.84[JPT][hapmap] |
| rs1525252 | 1.00[JPT][hapmap] |
| rs1525260 | 1.00[JPT][hapmap] |
| rs1525261 | 1.00[JPT][hapmap] |
| rs1525262 | 1.00[JPT][hapmap] |
| rs1525263 | 1.00[JPT][hapmap] |
| rs1638048 | 1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap] |
| rs17170636 | 1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
| rs17170668 | 1.00[JPT][hapmap] |
| rs17226520 | 0.85[JPT][hapmap] |
| rs17508203 | 1.00[JPT][hapmap] |
| rs1990251 | 1.00[JPT][hapmap] |
| rs2373178 | 0.80[YRI][hapmap] |
| rs2373179 | 1.00[JPT][hapmap] |
| rs4295581 | 0.81[YRI][hapmap] |
| rs6947112 | 1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
| rs700315 | 0.82[MEX][hapmap];0.87[YRI][hapmap] |
| rs700317 | 0.87[YRI][hapmap] |
| rs7457261 | 1.00[JPT][hapmap] |
| rs851683 | 1.00[JPT][hapmap] |
| rs851685 | 0.85[JPT][hapmap] |
| rs851731 | 0.95[ASN][1000 genomes] |
| rs954113 | 1.00[JPT][hapmap] |
mRNA abundance (count:2)
| SNP | Gene | Cis/trans | Tissue | Source |
|---|---|---|---|---|
| rs851735 | ATP6V0E2 | cis | parietal | SCAN |
| rs851735 | TMEM176B | cis | parietal | SCAN |
Chromatin state (count:0 , 50 per page) page:
| No data |
