Variant report

Variant	rs17463675
Chromosome Location	chr12:26287765-26287766
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11048402	1.00[AFR][1000 genomes]
rs1480037	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17366300	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17366955	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17367221	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17380333	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17380416	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17464133	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17464383	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1871557	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4963650	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4963958	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4963960	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4963962	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4963965	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4963966	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4963970	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7358598	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26280000-26287800	Weak transcription	Aorta	Aorta
2	chr12:26280600-26287800	Weak transcription	Brain Hippocampus Middle	brain
3	chr12:26280600-26290200	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr12:26284000-26287800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr12:26284200-26288200	Weak transcription	Spleen	Spleen
6	chr12:26286600-26288800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr12:26286600-26288800	Enhancers	HMEC	breast
8	chr12:26286800-26287800	Enhancers	Rectal Mucosa Donor 31	rectum
9	chr12:26286800-26288000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr12:26287000-26290400	Enhancers	Primary B cells from peripheral blood	blood
11	chr12:26287200-26287800	Enhancers	Rectal Mucosa Donor 29	rectum
12	chr12:26287200-26288000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr12:26287400-26288600	Enhancers	Duodenum Mucosa	Duodenum
14	chr12:26287600-26288200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr12:26287600-26288400	Enhancers	Fetal Lung	lung
16	chr12:26287600-26288800	Enhancers	NH-A	brain
17	chr12:26287600-26289600	Enhancers	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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