Variant report

Variant	rs7358598
Chromosome Location	chr12:26285545-26285546
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11048402	1.00[ASW][hapmap]
rs1480037	1.00[ASW][hapmap];1.00[CEU][hapmap];0.89[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17366300	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17366955	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17367221	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17380333	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17380416	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17463675	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17464133	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17464383	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1871557	0.87[EUR][1000 genomes]
rs4963650	0.85[EUR][1000 genomes]
rs4963958	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4963960	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4963962	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4963965	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4963966	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4963970	0.87[EUR][1000 genomes]
rs7953315	1.00[JPT][hapmap]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26280000-26287800	Weak transcription	Aorta	Aorta
2	chr12:26280400-26286800	Weak transcription	Brain Substantia Nigra	brain
3	chr12:26280600-26287800	Weak transcription	Brain Hippocampus Middle	brain
4	chr12:26280600-26290200	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr12:26281200-26286600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr12:26281600-26286600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr12:26281600-26286600	Weak transcription	HMEC	breast
8	chr12:26282800-26286000	Enhancers	Primary B cells from peripheral blood	blood
9	chr12:26284000-26287800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr12:26284200-26288200	Weak transcription	Spleen	Spleen

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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