The 2.0 version of rSNPBase

Variant report

Variant rs17525318
Chromosome Location chr18:12547389-12547390
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12478800-12551800 Weak transcription Pancreas Pancrea
2 chr18:12492200-12548600 Weak transcription Fetal Kidney kidney
3 chr18:12493200-12551800 Weak transcription Stomach Smooth Muscle stomach
4 chr18:12511400-12551800 Weak transcription Lung lung
5 chr18:12516000-12553200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr18:12516600-12555000 Weak transcription Aorta Aorta
7 chr18:12518600-12551800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr18:12520800-12551800 Weak transcription Colon Smooth Muscle Colon
9 chr18:12520800-12552000 Weak transcription NHLF lung
10 chr18:12521000-12552200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr18:12530600-12551600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr18:12533200-12551800 Weak transcription HSMMtube muscle
13 chr18:12534000-12551800 Weak transcription Fetal Brain Male brain
14 chr18:12534600-12551600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr18:12541000-12551800 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr18:12541000-12552000 Weak transcription Gastric stomach
17 chr18:12541400-12553000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr18:12542600-12551800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr18:12542600-12551800 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr18:12543200-12550400 Weak transcription HUVEC blood vessel
21 chr18:12543400-12551600 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr18:12543600-12551800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr18:12543800-12548200 Weak transcription Fetal Lung lung
24 chr18:12543800-12551800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr18:12543800-12551800 Weak transcription NH-A brain
26 chr18:12543800-12552000 Weak transcription Fetal Muscle Leg muscle
27 chr18:12544000-12551800 Weak transcription HSMM muscle
28 chr18:12544200-12547400 Weak transcription Fetal Brain Female brain
29 chr18:12544200-12551600 Weak transcription HMEC breast
30 chr18:12544800-12551800 Weak transcription Liver Liver
31 chr18:12545200-12553600 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr18:12545600-12553000 Weak transcription Psoas Muscle Psoas
33 chr18:12546800-12550200 Weak transcription Left Ventricle heart
34 chr18:12546800-12551800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr18:12546800-12551800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr18:12546800-12557000 Weak transcription Ovary ovary
37 chr18:12547000-12548800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr18:12547000-12549200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr18:12547000-12551800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015