The 2.0 version of rSNPBase

Variant report

Variant rs35280383
Chromosome Location chr18:12530293-12530294
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12478800-12551800 Weak transcription Pancreas Pancrea
2 chr18:12492200-12530400 Weak transcription HepG2 liver
3 chr18:12492200-12532800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr18:12492200-12548600 Weak transcription Fetal Kidney kidney
5 chr18:12493000-12541200 Weak transcription NHEK skin
6 chr18:12493200-12551800 Weak transcription Stomach Smooth Muscle stomach
7 chr18:12505200-12536800 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr18:12507400-12535200 Weak transcription Fetal Muscle Leg muscle
9 chr18:12509400-12539200 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr18:12511400-12551800 Weak transcription Lung lung
11 chr18:12516000-12553200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr18:12516400-12539000 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr18:12516600-12536600 Weak transcription Right Ventricle heart
14 chr18:12516600-12555000 Weak transcription Aorta Aorta
15 chr18:12516800-12534400 Weak transcription HUVEC blood vessel
16 chr18:12518600-12531200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr18:12518600-12540000 Weak transcription Adipose Nuclei Adipose
18 chr18:12518600-12551800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr18:12519000-12532800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr18:12520800-12530400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr18:12520800-12532800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr18:12520800-12533000 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr18:12520800-12543400 Weak transcription Osteobl bone
24 chr18:12520800-12551800 Weak transcription Colon Smooth Muscle Colon
25 chr18:12520800-12552000 Weak transcription NHLF lung
26 chr18:12521000-12531200 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr18:12521000-12533000 Weak transcription Brain Angular Gyrus brain
28 chr18:12521000-12533000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr18:12521000-12533200 Weak transcription Muscle Satellite Cultured Cells --
30 chr18:12521000-12533400 Weak transcription Brain Cingulate Gyrus brain
31 chr18:12521000-12539200 Weak transcription Fetal Stomach stomach
32 chr18:12521000-12542000 Weak transcription Ovary ovary
33 chr18:12521000-12542200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr18:12521000-12552200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr18:12521200-12538600 Weak transcription Brain Germinal Matrix brain
36 chr18:12521600-12536400 Weak transcription Left Ventricle heart
37 chr18:12525600-12540800 Weak transcription Gastric stomach
38 chr18:12526200-12532800 Weak transcription Fetal Brain Male brain
39 chr18:12526400-12534200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr18:12526400-12534600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr18:12526400-12534600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr18:12526400-12541400 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr18:12526600-12532800 Weak transcription Fetal Brain Female brain
44 chr18:12526600-12532800 Weak transcription HSMMtube muscle
45 chr18:12526800-12532800 Weak transcription HSMM muscle
46 chr18:12528800-12534000 Weak transcription Brain Inferior Temporal Lobe brain
47 chr18:12529000-12530400 Weak transcription Psoas Muscle Psoas
48 chr18:12529400-12530600 Enhancers HMEC breast
49 chr18:12529400-12532200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr18:12529600-12530600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015