The 2.0 version of rSNPBase

Variant report

Variant rs34054541
Chromosome Location chr18:12522897-12522898
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12478800-12551800 Weak transcription Pancreas Pancrea
2 chr18:12492200-12530400 Weak transcription HepG2 liver
3 chr18:12492200-12532800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr18:12492200-12548600 Weak transcription Fetal Kidney kidney
5 chr18:12493000-12541200 Weak transcription NHEK skin
6 chr18:12493200-12551800 Weak transcription Stomach Smooth Muscle stomach
7 chr18:12505200-12536800 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr18:12505400-12529400 Weak transcription HMEC breast
9 chr18:12507000-12526200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr18:12507400-12535200 Weak transcription Fetal Muscle Leg muscle
11 chr18:12509400-12539200 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr18:12511400-12551800 Weak transcription Lung lung
13 chr18:12516000-12553200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr18:12516400-12539000 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr18:12516600-12529400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr18:12516600-12536600 Weak transcription Right Ventricle heart
17 chr18:12516600-12555000 Weak transcription Aorta Aorta
18 chr18:12516800-12524600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr18:12516800-12534400 Weak transcription HUVEC blood vessel
20 chr18:12518400-12530200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr18:12518600-12531200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr18:12518600-12540000 Weak transcription Adipose Nuclei Adipose
23 chr18:12518600-12551800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr18:12519000-12532800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr18:12520800-12525800 Weak transcription Brain Substantia Nigra brain
26 chr18:12520800-12528200 Weak transcription Brain Inferior Temporal Lobe brain
27 chr18:12520800-12530400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr18:12520800-12532800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr18:12520800-12533000 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr18:12520800-12543400 Weak transcription Osteobl bone
31 chr18:12520800-12551800 Weak transcription Colon Smooth Muscle Colon
32 chr18:12520800-12552000 Weak transcription NHLF lung
33 chr18:12521000-12525600 Weak transcription HSMMtube muscle
34 chr18:12521000-12527600 Weak transcription Fetal Lung lung
35 chr18:12521000-12529800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr18:12521000-12531200 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr18:12521000-12533000 Weak transcription Brain Angular Gyrus brain
38 chr18:12521000-12533000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr18:12521000-12533200 Weak transcription Muscle Satellite Cultured Cells --
40 chr18:12521000-12533400 Weak transcription Brain Cingulate Gyrus brain
41 chr18:12521000-12539200 Weak transcription Fetal Stomach stomach
42 chr18:12521000-12542000 Weak transcription Ovary ovary
43 chr18:12521000-12542200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr18:12521000-12552200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr18:12521200-12526200 Weak transcription HSMM muscle
46 chr18:12521200-12538600 Weak transcription Brain Germinal Matrix brain
47 chr18:12521400-12525600 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr18:12521400-12525600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr18:12521600-12525400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr18:12521600-12525600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015