Variant report

Variant rs17525599
Chromosome Location chr18:12597521-12597522
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12590800-12597800 Weak transcription Pancreas Pancrea
2 chr18:12590800-12599200 Weak transcription Liver Liver
3 chr18:12592400-12597600 Weak transcription Colon Smooth Muscle Colon
4 chr18:12592800-12597800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr18:12594200-12597600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr18:12594600-12600400 Enhancers HepG2 liver
7 chr18:12595400-12598200 Enhancers Brain Anterior Caudate brain
8 chr18:12595400-12599400 Enhancers Fetal Heart heart
9 chr18:12595400-12600400 Enhancers Primary hematopoietic stem cells short term culture blood
10 chr18:12595600-12597600 Enhancers HUVEC blood vessel
11 chr18:12595600-12598000 Enhancers Brain Substantia Nigra brain
12 chr18:12595600-12600400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr18:12595600-12600400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr18:12595600-12600600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr18:12595800-12598200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr18:12595800-12599000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr18:12595800-12600600 Enhancers HMEC breast
18 chr18:12596000-12597600 Enhancers Primary T killer naive cells fromperipheralblood blood
19 chr18:12596000-12598000 Enhancers Primary T helper cells PMA-I stimulated --
20 chr18:12596000-12599200 Enhancers Fetal Lung lung
21 chr18:12596000-12599600 Enhancers Fetal Kidney kidney
22 chr18:12596200-12599200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr18:12596600-12597800 Enhancers Primary hematopoietic stem cells blood
24 chr18:12596600-12600000 Enhancers Breast Myoepithelial Primary Cells Breast
25 chr18:12596800-12597600 Enhancers HUES6 Cell Line embryonic stem cell
26 chr18:12596800-12597600 Enhancers iPS-20b Cell Line embryonic stem cell
27 chr18:12596800-12597600 Enhancers Primary T helper cells fromperipheralblood blood
28 chr18:12596800-12597600 Enhancers Osteobl bone
29 chr18:12596800-12597800 Flanking Active TSS Muscle Satellite Cultured Cells --
30 chr18:12596800-12597800 Enhancers Right Ventricle heart
31 chr18:12596800-12598000 Enhancers H1 Cell Line embryonic stem cell
32 chr18:12596800-12598000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr18:12596800-12598000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr18:12596800-12598000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr18:12596800-12598000 Enhancers Primary T cells fromperipheralblood blood
36 chr18:12596800-12598000 Enhancers Brain Hippocampus Middle brain
37 chr18:12596800-12598000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
38 chr18:12596800-12598000 Enhancers Fetal Thymus thymus
39 chr18:12596800-12598200 Enhancers Left Ventricle heart
40 chr18:12596800-12598200 Enhancers Right Atrium heart
41 chr18:12596800-12598600 Enhancers NH-A brain
42 chr18:12596800-12598800 Enhancers Placenta Amnion Placenta Amnion
43 chr18:12596800-12599200 Enhancers ES-I3 Cell Line embryonic stem cell
44 chr18:12596800-12599600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr18:12596800-12599800 Enhancers Fetal Brain Female brain
46 chr18:12596800-12600400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr18:12596800-12600400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
48 chr18:12596800-12600400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr18:12596800-12600400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr18:12596800-12600600 Enhancers NHDF-Ad bronchial

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