Variant report

Variant rs17615801
Chromosome Location chr18:12533241-12533242
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12478800-12551800 Weak transcription Pancreas Pancrea
2 chr18:12492200-12548600 Weak transcription Fetal Kidney kidney
3 chr18:12493000-12541200 Weak transcription NHEK skin
4 chr18:12493200-12551800 Weak transcription Stomach Smooth Muscle stomach
5 chr18:12505200-12536800 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr18:12507400-12535200 Weak transcription Fetal Muscle Leg muscle
7 chr18:12509400-12539200 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr18:12511400-12551800 Weak transcription Lung lung
9 chr18:12516000-12553200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr18:12516400-12539000 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr18:12516600-12536600 Weak transcription Right Ventricle heart
12 chr18:12516600-12555000 Weak transcription Aorta Aorta
13 chr18:12516800-12534400 Weak transcription HUVEC blood vessel
14 chr18:12518600-12540000 Weak transcription Adipose Nuclei Adipose
15 chr18:12518600-12551800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr18:12520800-12543400 Weak transcription Osteobl bone
17 chr18:12520800-12551800 Weak transcription Colon Smooth Muscle Colon
18 chr18:12520800-12552000 Weak transcription NHLF lung
19 chr18:12521000-12533400 Weak transcription Brain Cingulate Gyrus brain
20 chr18:12521000-12539200 Weak transcription Fetal Stomach stomach
21 chr18:12521000-12542000 Weak transcription Ovary ovary
22 chr18:12521000-12542200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr18:12521000-12552200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr18:12521200-12538600 Weak transcription Brain Germinal Matrix brain
25 chr18:12521600-12536400 Weak transcription Left Ventricle heart
26 chr18:12525600-12540800 Weak transcription Gastric stomach
27 chr18:12526400-12534200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr18:12526400-12534600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr18:12526400-12534600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr18:12526400-12541400 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr18:12528800-12534000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr18:12530600-12536000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr18:12530600-12540000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr18:12530600-12541000 Weak transcription HMEC breast
35 chr18:12530600-12551600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr18:12530800-12533800 Weak transcription HepG2 liver
37 chr18:12531600-12535200 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr18:12531600-12537000 Weak transcription Fetal Muscle Trunk muscle
39 chr18:12532200-12540800 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr18:12532800-12533400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr18:12532800-12533400 Genic enhancers HSMM muscle
42 chr18:12532800-12533600 Enhancers Fetal Brain Female brain
43 chr18:12533000-12533800 Enhancers Brain Angular Gyrus brain
44 chr18:12533000-12534000 Enhancers Pancreatic Islets Pancreatic Islet
45 chr18:12533200-12533400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr18:12533200-12533400 Enhancers Fetal Brain Male brain
47 chr18:12533200-12533600 Enhancers Muscle Satellite Cultured Cells --
48 chr18:12533200-12534000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr18:12533200-12534200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr18:12533200-12540000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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