Variant report
| Variant | rs34088731 |
|---|---|
| Chromosome Location | chr18:12519334-12519335 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:12478800-12551800 | Weak transcription | Pancreas | Pancrea |
| 2 | chr18:12492200-12530400 | Weak transcription | HepG2 | liver |
| 3 | chr18:12492200-12532800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 4 | chr18:12492200-12548600 | Weak transcription | Fetal Kidney | kidney |
| 5 | chr18:12493000-12541200 | Weak transcription | NHEK | skin |
| 6 | chr18:12493200-12520000 | Weak transcription | Colon Smooth Muscle | Colon |
| 7 | chr18:12493200-12520400 | Weak transcription | Psoas Muscle | Psoas |
| 8 | chr18:12493200-12551800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 9 | chr18:12500800-12520600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 10 | chr18:12502000-12520600 | Weak transcription | Fetal Stomach | stomach |
| 11 | chr18:12505200-12536800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 12 | chr18:12505400-12529400 | Weak transcription | HMEC | breast |
| 13 | chr18:12505600-12520000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 14 | chr18:12507000-12526200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 15 | chr18:12507400-12535200 | Weak transcription | Fetal Muscle Leg | muscle |
| 16 | chr18:12509400-12539200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 17 | chr18:12511400-12520000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 18 | chr18:12511400-12520200 | Weak transcription | HSMM | muscle |
| 19 | chr18:12511400-12521600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 20 | chr18:12511400-12551800 | Weak transcription | Lung | lung |
| 21 | chr18:12511800-12520400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 22 | chr18:12511800-12520600 | Weak transcription | HSMMtube | muscle |
| 23 | chr18:12514600-12522000 | Enhancers | Fetal Brain Male | brain |
| 24 | chr18:12515600-12521400 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 25 | chr18:12516000-12553200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 26 | chr18:12516400-12520400 | Weak transcription | Brain Angular Gyrus | brain |
| 27 | chr18:12516400-12520400 | Weak transcription | NHLF | lung |
| 28 | chr18:12516400-12539000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 29 | chr18:12516600-12519600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 30 | chr18:12516600-12519800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 31 | chr18:12516600-12520000 | Weak transcription | NHDF-Ad | bronchial |
| 32 | chr18:12516600-12520600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 33 | chr18:12516600-12520800 | Weak transcription | Left Ventricle | heart |
| 34 | chr18:12516600-12529400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 35 | chr18:12516600-12536600 | Weak transcription | Right Ventricle | heart |
| 36 | chr18:12516600-12555000 | Weak transcription | Aorta | Aorta |
| 37 | chr18:12516800-12519800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 38 | chr18:12516800-12520000 | Weak transcription | Osteobl | bone |
| 39 | chr18:12516800-12520400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 40 | chr18:12516800-12520400 | Weak transcription | Fetal Heart | heart |
| 41 | chr18:12516800-12524600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 42 | chr18:12516800-12534400 | Weak transcription | HUVEC | blood vessel |
| 43 | chr18:12517000-12520200 | Weak transcription | Brain Hippocampus Middle | brain |
| 44 | chr18:12517000-12520600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 45 | chr18:12517200-12519400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 46 | chr18:12517200-12520400 | Weak transcription | Brain Substantia Nigra | brain |
| 47 | chr18:12517600-12520000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 48 | chr18:12517800-12519600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 49 | chr18:12518000-12519400 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 50 | chr18:12518200-12520200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
