Variant report

Variant rs35612342
Chromosome Location chr18:12645477-12645478
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12607800-12651800 Weak transcription Brain Germinal Matrix brain
2 chr18:12631200-12647800 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr18:12633600-12655800 Weak transcription Fetal Stomach stomach
4 chr18:12635000-12645800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr18:12635200-12645800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr18:12637800-12652000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr18:12639600-12645800 Weak transcription Esophagus oesophagus
8 chr18:12640400-12652000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr18:12641000-12645800 Weak transcription K562 blood
10 chr18:12641000-12646000 Weak transcription Right Ventricle heart
11 chr18:12641000-12648200 Weak transcription Hela-S3 cervix
12 chr18:12641200-12645600 Weak transcription Fetal Lung lung
13 chr18:12641200-12645600 Weak transcription NHDF-Ad bronchial
14 chr18:12641200-12645800 Weak transcription Lung lung
15 chr18:12641400-12647200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr18:12641600-12645800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr18:12642200-12645600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr18:12642600-12645800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr18:12642600-12646200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr18:12642800-12645600 Weak transcription Adipose Nuclei Adipose
21 chr18:12643200-12645600 Enhancers Muscle Satellite Cultured Cells --
22 chr18:12643200-12646200 Enhancers HMEC breast
23 chr18:12643200-12646600 Enhancers Cortex derived primary cultured neurospheres brain
24 chr18:12643400-12646200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr18:12643400-12646400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr18:12643400-12646400 Enhancers Psoas Muscle Psoas
27 chr18:12643600-12651800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr18:12643800-12645600 Weak transcription NHLF lung
29 chr18:12643800-12653000 Weak transcription A549 lung
30 chr18:12644000-12646800 Enhancers Fetal Brain Male brain
31 chr18:12644200-12646200 Enhancers HUVEC blood vessel
32 chr18:12644400-12646200 Enhancers Osteobl bone
33 chr18:12644400-12646600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr18:12644400-12646600 Enhancers NHEK skin
35 chr18:12644400-12651800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr18:12644800-12645600 Enhancers Brain Hippocampus Middle brain
37 chr18:12644800-12645800 Enhancers Brain Cingulate Gyrus brain
38 chr18:12645000-12645600 Enhancers Brain Angular Gyrus brain
39 chr18:12645000-12645800 Enhancers Brain Inferior Temporal Lobe brain
40 chr18:12645000-12646000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr18:12645000-12646000 Flanking Active TSS Fetal Brain Female brain
42 chr18:12645000-12646200 Enhancers Brain Substantia Nigra brain
43 chr18:12645000-12646200 Enhancers Colon Smooth Muscle Colon
44 chr18:12645000-12646200 Enhancers Fetal Kidney kidney
45 chr18:12645000-12646200 Enhancers Right Atrium heart
46 chr18:12645200-12645800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
47 chr18:12645200-12645800 Enhancers HSMM muscle
48 chr18:12645200-12646000 Enhancers Rectal Smooth Muscle rectum
49 chr18:12645200-12646200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
50 chr18:12645200-12646200 Enhancers Liver Liver

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