Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10138508	0.82[ASN][1000 genomes]
rs11625785	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12100805	0.82[ASN][1000 genomes]
rs17108408	0.94[ASN][1000 genomes]
rs17108415	0.94[ASN][1000 genomes]
rs17108433	0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1885138	0.90[ASN][1000 genomes]
rs1885139	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1951218	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1957048	0.84[ASN][1000 genomes]
rs2093267	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2104092	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2145604	0.83[ASN][1000 genomes]
rs2145605	0.84[ASN][1000 genomes]
rs2180879	0.83[ASN][1000 genomes]
rs56143253	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62001072	0.85[ASN][1000 genomes]
rs7142768	0.84[ASN][1000 genomes]
rs7144708	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7145908	0.85[ASN][1000 genomes]
rs7158719	0.84[ASN][1000 genomes]
rs9322991	0.81[CEU][hapmap]
rs988420	0.85[ASN][1000 genomes]
rs990487	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv564416	chr14:39140536-39440106	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv470631	chr14:39153764-39440106	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	esv3429206	chr14:39160730-39648836	Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
4	nsv932194	chr14:39173578-39411337	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:39323200-39324000	Enhancers	Left Ventricle	heart
2	chr14:39323400-39324000	Weak transcription	Primary neutrophils fromperipheralblood	blood

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