Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:76493136..76496229-chr2:76496257..76499157,3	MCF-7	breast:
2	chr2:76491531..76493683-chr2:76495220..76497956,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1000459	0.91[ASN][1000 genomes]
rs10164668	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10177266	1.00[ASN][1000 genomes]
rs10209467	1.00[ASN][1000 genomes]
rs10432645	0.94[ASN][1000 genomes]
rs12466869	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12468320	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12474933	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13393516	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13397093	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13397174	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13410946	0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13422561	0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1405342	0.94[ASN][1000 genomes]
rs1405347	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1526616	0.89[ASN][1000 genomes]
rs1526618	0.94[ASN][1000 genomes]
rs1526631	0.94[ASN][1000 genomes]
rs1609006	0.91[ASN][1000 genomes]
rs1609007	0.94[ASN][1000 genomes]
rs1609008	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59897260	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6704909	0.91[ASN][1000 genomes]
rs6743740	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6747727	0.89[ASN][1000 genomes]
rs7563396	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7567752	0.81[ASN][1000 genomes]
rs7574697	0.81[ASN][1000 genomes]
rs7587052	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874312	chr2:76430941-76500077	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76492400-76505200	Weak transcription	Fetal Muscle Leg	muscle
2	chr2:76495400-76497200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr2:76495400-76503600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr2:76495600-76497400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr2:76496000-76498000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr2:76496600-76503800	Enhancers	Hela-S3	cervix
7	chr2:76497000-76497600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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