Variant report

Variant	rs10164668
Chromosome Location	chr2:76518088-76518089
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:187432536..187433097-chr2:76517809..76518771,2	MCF-7	breast:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs1000459	0.91[ASN][1000 genomes]
rs10177266	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10196032	0.86[AMR][1000 genomes]
rs10209467	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10432645	0.94[ASN][1000 genomes]
rs12466869	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12468320	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12474933	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13393516	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13397093	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13397174	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13410946	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13422561	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1405342	0.94[ASN][1000 genomes]
rs1405347	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1526614	0.80[AMR][1000 genomes]
rs1526616	0.89[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs1526618	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1526631	0.94[ASN][1000 genomes]
rs1609006	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs1609007	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1609008	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17703545	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1852365	0.84[AMR][1000 genomes]
rs1949924	0.80[AMR][1000 genomes]
rs59897260	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6704909	0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs6743740	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6747714	0.86[AMR][1000 genomes]
rs6747727	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs6748106	0.86[AMR][1000 genomes]
rs6760707	0.86[AMR][1000 genomes]
rs7563396	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7567752	0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7574697	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7587052	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76508800-76520200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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