Variant report

Variant	rs6704909
Chromosome Location	chr2:76521141-76521142
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs1000458	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs1000459	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10164668	0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10177266	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10209467	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10432645	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12466869	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs12468320	0.91[ASN][1000 genomes]
rs12474933	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs13393516	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs13397093	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs13397174	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs13410946	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs13422561	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1405342	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1405347	0.91[ASN][1000 genomes]
rs1526614	0.82[ASN][1000 genomes]
rs1526616	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1526618	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1526631	0.97[ASN][1000 genomes]
rs1589948	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1609006	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1609007	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1609008	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs17703545	0.91[ASN][1000 genomes]
rs1949924	0.81[ASN][1000 genomes]
rs2860733	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4853212	0.95[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs59897260	0.89[ASN][1000 genomes]
rs6743740	0.88[ASN][1000 genomes]
rs6747727	0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7563396	0.91[ASN][1000 genomes]
rs7567752	0.83[AFR][1000 genomes]
rs7574697	0.87[AFR][1000 genomes]
rs7587052	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76520600-76524800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr2:76521000-76521200	Enhancers	Brain Cingulate Gyrus	brain
3	chr2:76521000-76521200	Enhancers	Brain Hippocampus Middle	brain
4	chr2:76521000-76521400	Enhancers	Brain Anterior Caudate	brain

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