Variant report
| Variant | rs177544 |
|---|---|
| Chromosome Location | chr11:16925046-16925047 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:16914000-16927400 | Weak transcription | HSMMtube | muscle |
| 2 | chr11:16916000-16931000 | Weak transcription | Spleen | Spleen |
| 3 | chr11:16919400-16927000 | Weak transcription | Fetal Muscle Leg | muscle |
| 4 | chr11:16919600-16925400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 5 | chr11:16919800-16933600 | Weak transcription | Fetal Kidney | kidney |
| 6 | chr11:16920400-16927000 | Weak transcription | Right Atrium | heart |
| 7 | chr11:16921600-16927000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 8 | chr11:16921600-16927200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 9 | chr11:16921800-16926600 | Weak transcription | Gastric | stomach |
| 10 | chr11:16921800-16926600 | Weak transcription | Pancreas | Pancrea |
| 11 | chr11:16921800-16927000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr11:16922000-16934000 | Weak transcription | HepG2 | liver |
| 13 | chr11:16922200-16927200 | Weak transcription | Fetal Lung | lung |
| 14 | chr11:16922800-16925600 | Enhancers | HMEC | breast |
| 15 | chr11:16923000-16925800 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 16 | chr11:16923000-16926000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 17 | chr11:16923200-16925800 | Enhancers | Primary B cells from peripheral blood | blood |
| 18 | chr11:16923400-16925600 | Flanking Active TSS | GM12878-XiMat | blood |
| 19 | chr11:16923400-16926000 | Enhancers | Stomach Mucosa | stomach |
| 20 | chr11:16923400-16927400 | Enhancers | Fetal Intestine Large | intestine |
| 21 | chr11:16923600-16925400 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 22 | chr11:16923600-16925600 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 23 | chr11:16923600-16925800 | Enhancers | Fetal Intestine Small | intestine |
| 24 | chr11:16923800-16927800 | Enhancers | Fetal Heart | heart |
| 25 | chr11:16924200-16925400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 26 | chr11:16924200-16925600 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 27 | chr11:16924200-16926600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 28 | chr11:16924200-16927200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 29 | chr11:16924400-16925200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 30 | chr11:16924800-16925200 | Enhancers | Colonic Mucosa | Colon |
| 31 | chr11:16924800-16925200 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
| 32 | chr11:16924800-16925200 | Enhancers | Left Ventricle | heart |
| 33 | chr11:16924800-16925600 | Enhancers | HUVEC | blood vessel |
| 34 | chr11:16924800-16925800 | Enhancers | Small Intestine | intestine |
| 35 | chr11:16924800-16926600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 36 | chr11:16924800-16927000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 37 | chr11:16924800-16927000 | Weak transcription | A549 | lung |
| 38 | chr11:16924800-16927400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 39 | chr11:16925000-16926600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 40 | chr11:16925000-16927000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 41 | chr11:16925000-16927200 | Weak transcription | Esophagus | oesophagus |
| 42 | chr11:16925000-16927200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 43 | chr11:16925000-16927400 | Weak transcription | Adipose Nuclei | Adipose |
