Variant report

Variant	rs1869167
Chromosome Location	chr10:48578370-48578371
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:48573686..48575783-chr10:48577715..48579517,2	MCF-7	breast:
2	chr10:48573259..48576256-chr10:48576994..48579438,2	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10788713	0.80[EUR][1000 genomes]
rs1452289	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1452291	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1890776	0.80[EUR][1000 genomes]
rs2100343	0.80[EUR][1000 genomes]
rs2382747	0.87[EUR][1000 genomes]
rs3850926	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4256917	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4465317	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7074717	0.81[EUR][1000 genomes]
rs7092829	0.80[EUR][1000 genomes]
rs716709	0.80[EUR][1000 genomes]
rs718332	0.80[EUR][1000 genomes]
rs896570	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9421840	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9422316	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9422319	0.96[ASN][1000 genomes]
rs9422323	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9422326	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9422348	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9422349	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9731295	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs987901	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:48574400-48578600	Weak transcription	Fetal Muscle Leg	muscle
2	chr10:48574800-48578400	Weak transcription	Fetal Stomach	stomach
3	chr10:48574800-48578600	Weak transcription	Lung	lung
4	chr10:48575000-48579000	Weak transcription	Fetal Lung	lung
5	chr10:48575600-48598200	Weak transcription	NH-A	brain
6	chr10:48577200-48579200	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr10:48577400-48578800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr10:48577600-48579400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr10:48577600-48579600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr10:48577800-48578600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
11	chr10:48577800-48579200	Enhancers	NHLF	lung
12	chr10:48577800-48579400	Enhancers	Colon Smooth Muscle	Colon
13	chr10:48578000-48578400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr10:48578000-48579600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr10:48578200-48578400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr10:48578200-48578800	Enhancers	Spleen	Spleen
17	chr10:48578200-48579600	Enhancers	Stomach Smooth Muscle	stomach

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