Variant report

Variant	rs9731295
Chromosome Location	chr10:48562474-48562475
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1452289	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1452291	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1869167	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2382747	0.84[EUR][1000 genomes]
rs3850926	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4256917	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4465317	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4489675	0.82[ASN][1000 genomes]
rs896570	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9421840	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9422316	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9422319	0.86[ASN][1000 genomes]
rs9422323	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9422326	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9422348	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9422349	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs987901	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:48540800-48562800	Weak transcription	Right Atrium	heart
2	chr10:48551800-48563200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr10:48557200-48562600	Weak transcription	Stomach Smooth Muscle	stomach
4	chr10:48558200-48562600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr10:48560200-48563800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr10:48560600-48563600	Enhancers	NHDF-Ad	bronchial
7	chr10:48560800-48565200	Enhancers	Fetal Lung	lung
8	chr10:48561000-48563200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr10:48561000-48564200	Enhancers	Fetal Stomach	stomach
10	chr10:48562200-48562800	Enhancers	Rectal Mucosa Donor 31	rectum
11	chr10:48562200-48569200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr10:48562400-48562800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr10:48562400-48562800	Enhancers	NHLF	lung
14	chr10:48562400-48563200	Enhancers	Fetal Muscle Leg	muscle
15	chr10:48562400-48563400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
16	chr10:48562400-48563600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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