The 2.0 version of rSNPBase

Variant report

Variant rs1880942
Chromosome Location chr4:101953182-101953183
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:101931200-101958000 Weak transcription Ovary ovary
2 chr4:101936200-101967800 Weak transcription Fetal Kidney kidney
3 chr4:101940800-101958200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr4:101941000-101960200 Weak transcription Colonic Mucosa Colon
5 chr4:101941200-101971000 Weak transcription Psoas Muscle Psoas
6 chr4:101941200-102000200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr4:101941200-102035600 Weak transcription Fetal Intestine Small intestine
8 chr4:101941600-101959400 Weak transcription HepG2 liver
9 chr4:101941800-101959200 Weak transcription Left Ventricle heart
10 chr4:101942000-101970200 Weak transcription Brain Hippocampus Middle brain
11 chr4:101942400-101960200 Weak transcription Fetal Muscle Trunk muscle
12 chr4:101942400-101971400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr4:101942600-101953200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr4:101942600-101966800 Weak transcription Gastric stomach
15 chr4:101942600-102003200 Weak transcription Rectal Smooth Muscle rectum
16 chr4:101942600-102024400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr4:101942800-101953200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr4:101942800-101959600 Weak transcription Lung lung
19 chr4:101943000-101954000 Weak transcription Brain Germinal Matrix brain
20 chr4:101943000-101959000 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr4:101943000-101961800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr4:101943200-101953200 Weak transcription H9 Cell Line embryonic stem cell
23 chr4:101943200-101959200 Weak transcription Primary T cells fromperipheralblood blood
24 chr4:101943200-101967400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr4:101943200-101967400 Weak transcription Spleen Spleen
26 chr4:101943400-101953200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr4:101943400-101959000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr4:101943400-101964200 Weak transcription Colon Smooth Muscle Colon
29 chr4:101943400-101967200 Weak transcription Fetal Brain Male brain
30 chr4:101943600-101958800 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr4:101943800-101958200 Weak transcription Placenta Amnion Placenta Amnion
32 chr4:101943800-101958800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr4:101943800-101960800 Weak transcription Esophagus oesophagus
34 chr4:101943800-102023400 Weak transcription Fetal Lung lung
35 chr4:101944000-101954800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr4:101944000-101958800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr4:101944000-101959000 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr4:101944000-101962000 Weak transcription A549 lung
39 chr4:101944000-101964600 Weak transcription NHLF lung
40 chr4:101944200-101953400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr4:101944400-101953200 Weak transcription Fetal Intestine Large intestine
42 chr4:101944400-101959200 Weak transcription NHDF-Ad bronchial
43 chr4:101944400-101968400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr4:101944400-101981200 Weak transcription Pancreas Pancrea
45 chr4:101944400-102000200 Weak transcription Fetal Stomach stomach
46 chr4:101945400-101961000 Weak transcription Fetal Brain Female brain
47 chr4:101945400-101961600 Weak transcription Stomach Smooth Muscle stomach
48 chr4:101945600-101970800 Weak transcription Brain Cingulate Gyrus brain
49 chr4:101945800-101960400 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr4:101945800-101970800 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015