Variant report
Variant | rs1907790 |
---|---|
Chromosome Location | chr10:25364341-25364342 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr10:25362224..25363937-chr10:25363978..25365901,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10828750 | 0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs10828751 | 0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs10828752 | 0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs10828754 | 0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs10828755 | 0.92[ASN][1000 genomes] |
rs11014367 | 0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs11014368 | 0.80[ASN][1000 genomes] |
rs11014375 | 0.88[ASN][1000 genomes] |
rs11014379 | 0.94[ASN][1000 genomes] |
rs12764623 | 0.90[ASN][1000 genomes] |
rs12773782 | 0.94[ASN][1000 genomes] |
rs1352982 | 0.83[EUR][1000 genomes] |
rs1492607 | 0.92[ASN][1000 genomes] |
rs1552770 | 0.94[ASN][1000 genomes] |
rs1552771 | 0.90[ASN][1000 genomes] |
rs1963584 | 0.82[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs2087781 | 0.81[ASN][1000 genomes] |
rs2367507 | 0.82[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs4508094 | 0.81[ASN][1000 genomes] |
rs4749004 | 0.94[ASN][1000 genomes] |
rs4749005 | 0.93[ASN][1000 genomes] |
rs6482468 | 0.80[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs7898431 | 0.87[EUR][1000 genomes] |
rs902906 | 0.82[ASN][1000 genomes] |
rs923757 | 0.89[ASN][1000 genomes] |
rs923758 | 0.94[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv550224 | chr10:25335854-25385858 | Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats | TF binding regionCpG islandChromatin interactive region | 6 gene(s) | inside rSNPs | diseases |
2 | nsv1036683 | chr10:25337592-25398119 | Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive region | 7 gene(s) | inside rSNPs | diseases |
3 | nsv894969 | chr10:25345720-25395579 | Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive region | 6 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr10:25364000-25365400 | Weak transcription | K562 | blood |