Variant report

Variant	rs1943656
Chromosome Location	chr11:121063130-121063131
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 73 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:73)

rs_ID	r²[population]
rs10892676	0.91[EUR][1000 genomes]
rs10892692	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11218148	0.83[EUR][1000 genomes]
rs11218158	0.91[EUR][1000 genomes]
rs11218160	0.90[EUR][1000 genomes]
rs11826847	0.91[EUR][1000 genomes]
rs12275038	0.91[EUR][1000 genomes]
rs12279811	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12280641	0.83[EUR][1000 genomes]
rs12285467	0.90[EUR][1000 genomes]
rs12285468	0.90[EUR][1000 genomes]
rs12288505	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1939934	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1941299	1.00[ASN][1000 genomes]
rs34002948	0.90[EUR][1000 genomes]
rs34217740	0.88[EUR][1000 genomes]
rs4427574	0.89[EUR][1000 genomes]
rs4499012	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4539330	0.87[EUR][1000 genomes]
rs4623911	0.91[EUR][1000 genomes]
rs4641485	0.91[EUR][1000 genomes]
rs489985	0.93[EUR][1000 genomes]
rs4935760	0.89[EUR][1000 genomes]
rs4935762	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs4935763	0.88[AFR][1000 genomes]
rs4936576	0.83[EUR][1000 genomes]
rs4936578	0.83[EUR][1000 genomes]
rs4936579	0.89[EUR][1000 genomes]
rs4936582	0.91[EUR][1000 genomes]
rs4936583	0.91[EUR][1000 genomes]
rs4936584	0.91[EUR][1000 genomes]
rs4936585	0.91[EUR][1000 genomes]
rs4936586	0.91[EUR][1000 genomes]
rs4936587	0.91[EUR][1000 genomes]
rs4936590	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4936591	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4936593	0.86[AFR][1000 genomes]
rs509058	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs513182	0.89[EUR][1000 genomes]
rs524392	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs528958	0.90[EUR][1000 genomes]
rs541623	0.90[EUR][1000 genomes]
rs580683	0.93[EUR][1000 genomes]
rs581786	0.91[EUR][1000 genomes]
rs606674	0.90[EUR][1000 genomes]
rs607014	0.90[EUR][1000 genomes]
rs607999	0.90[EUR][1000 genomes]
rs614634	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs615697	0.93[EUR][1000 genomes]
rs616184	0.93[EUR][1000 genomes]
rs620164	0.90[EUR][1000 genomes]
rs620778	0.90[EUR][1000 genomes]
rs624428	0.90[EUR][1000 genomes]
rs639891	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6589862	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs665743	0.91[EUR][1000 genomes]
rs688106	0.91[EUR][1000 genomes]
rs7105356	0.91[EUR][1000 genomes]
rs7108587	0.91[EUR][1000 genomes]
rs7108594	0.91[EUR][1000 genomes]
rs7108741	0.89[EUR][1000 genomes]
rs7108971	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7110565	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7114879	0.90[EUR][1000 genomes]
rs7114915	0.91[EUR][1000 genomes]
rs7120647	0.91[EUR][1000 genomes]
rs7122110	0.91[EUR][1000 genomes]
rs7125224	0.83[EUR][1000 genomes]
rs7128792	0.89[EUR][1000 genomes]
rs7130952	0.90[EUR][1000 genomes]
rs877538	0.91[EUR][1000 genomes]
rs9736671	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9943635	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121052800-121065600	Weak transcription	Gastric	stomach
2	chr11:121053800-121065600	Weak transcription	Pancreas	Pancrea
3	chr11:121055400-121065600	Weak transcription	Ovary	ovary
4	chr11:121055600-121065600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr11:121056800-121065400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr11:121056800-121065600	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr11:121058000-121065400	Weak transcription	Fetal Lung	lung
8	chr11:121058800-121069000	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr11:121061800-121063200	Enhancers	Right Atrium	heart
10	chr11:121062600-121063200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr11:121062600-121065600	Weak transcription	HSMMtube	muscle
12	chr11:121062600-121070000	Weak transcription	Fetal Heart	heart
13	chr11:121063000-121065600	Weak transcription	Brain Cingulate Gyrus	brain

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