Variant report

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10445856	1.00[CHB][hapmap]
rs10445857	1.00[CHB][hapmap]
rs10496631	1.00[CHB][hapmap]
rs11123042	1.00[CHB][hapmap]
rs11689115	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11888989	1.00[CHB][hapmap]
rs12373656	1.00[CHB][hapmap]
rs1304052	1.00[CHB][hapmap]
rs1358669	1.00[CHB][hapmap]
rs1394144	1.00[CHB][hapmap]
rs1394145	1.00[CHB][hapmap]
rs1430251	1.00[CHB][hapmap]
rs1430268	1.00[CHB][hapmap]
rs1503997	1.00[CHB][hapmap]
rs1504000	1.00[CHB][hapmap]
rs1574504	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap]
rs17320237	1.00[CHB][hapmap]
rs17392197	1.00[CHB][hapmap]
rs17666092	1.00[CHB][hapmap]
rs17666152	1.00[CHB][hapmap]
rs17722007	1.00[CHB][hapmap]
rs17722506	1.00[CHB][hapmap]
rs17722749	1.00[CHB][hapmap]
rs17725595	1.00[CHB][hapmap]
rs17725619	1.00[CHB][hapmap]
rs1827596	1.00[CHB][hapmap]
rs1847429	1.00[CHB][hapmap]
rs4555349	1.00[CHB][hapmap]
rs4848936	1.00[CHB][hapmap]
rs6541957	1.00[CHB][hapmap]
rs6541961	1.00[CHB][hapmap]
rs6708079	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs6722877	1.00[ASN][1000 genomes]
rs869760	1.00[CHB][hapmap]
rs905630	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014610	chr2:125124983-125350342	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv834355	chr2:125128585-125291043	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv834356	chr2:125141494-125315418	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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