Variant report

No.	Distal block	Cell Line	Cell type
1	chr13:30882921..30884448-chr13:30901661..30903319,2	K562	blood:
2	chr13:30897317..30899409-chr13:30902997..30905720,2	K562	blood:
3	chr13:30889520..30891949-chr13:30901907..30903845,2	K562	blood:
4	chr13:30881592..30883659-chr13:30901595..30903819,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000102781	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11616886	0.81[EUR][1000 genomes]
rs1275179	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1275180	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1291150	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1621497	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1754937	0.84[ASN][1000 genomes]
rs200507	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs200509	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs202102	0.92[EUR][1000 genomes]
rs202103	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs202108	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2077011	0.81[EUR][1000 genomes]
rs2149852	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2183284	0.83[ASN][1000 genomes]
rs55825913	0.80[AMR][1000 genomes]
rs595756	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs657160	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7997259	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9285072	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9578163	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9579556	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9579558	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:30882200-30910800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
2	chr13:30882400-30905400	Weak transcription	Right Ventricle	heart
3	chr13:30882400-30905400	Weak transcription	Stomach Smooth Muscle	stomach
4	chr13:30888000-30903400	Weak transcription	Fetal Thymus	thymus
5	chr13:30888000-30909600	Weak transcription	Thymus	Thymus
6	chr13:30889400-30906400	Weak transcription	Primary B cells from cord blood	blood
7	chr13:30892800-30913400	Weak transcription	Psoas Muscle	Psoas
8	chr13:30894800-30905400	Weak transcription	Brain Anterior Caudate	brain
9	chr13:30897200-30905600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr13:30898200-30903400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr13:30901000-30903800	Enhancers	Fetal Heart	heart
12	chr13:30901800-30905400	Weak transcription	Fetal Muscle Leg	muscle
13	chr13:30902400-30904800	Enhancers	Dnd41	blood
14	chr13:30902800-30903800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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