Variant report

Variant	rs9285072
Chromosome Location	chr13:30901212-30901213
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:30898272..30900349-chr13:30900805..30902399,2	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11616886	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1275179	0.91[CEU][hapmap];0.87[TSI][hapmap];0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1275180	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1291150	0.80[EUR][1000 genomes]
rs13378210	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1621497	0.91[CEU][hapmap];0.80[EUR][1000 genomes]
rs1754937	0.88[CEU][hapmap]
rs17589894	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs200507	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs200508	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs200509	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs202102	0.88[CEU][hapmap];0.83[TSI][hapmap];0.85[EUR][1000 genomes]
rs202103	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2077011	0.82[ASW][hapmap];0.96[CEU][hapmap];0.94[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2149852	0.80[EUR][1000 genomes]
rs55825913	0.95[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs595756	0.86[EUR][1000 genomes]
rs657160	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9550555	0.98[EUR][1000 genomes]
rs9578161	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9578163	0.80[EUR][1000 genomes]
rs9579556	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9579558	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:30882200-30910800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
2	chr13:30882400-30905400	Weak transcription	Right Ventricle	heart
3	chr13:30882400-30905400	Weak transcription	Stomach Smooth Muscle	stomach
4	chr13:30888000-30903400	Weak transcription	Fetal Thymus	thymus
5	chr13:30888000-30909600	Weak transcription	Thymus	Thymus
6	chr13:30889400-30906400	Weak transcription	Primary B cells from cord blood	blood
7	chr13:30889600-30902400	Weak transcription	Primary hematopoietic stem cells	blood
8	chr13:30892800-30913400	Weak transcription	Psoas Muscle	Psoas
9	chr13:30894200-30903000	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr13:30894800-30905400	Weak transcription	Brain Anterior Caudate	brain
11	chr13:30897200-30905600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr13:30898200-30903400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr13:30900000-30902400	Weak transcription	Dnd41	blood
14	chr13:30901000-30903800	Enhancers	Fetal Heart	heart

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