Variant report

Variant	rs2031766
Chromosome Location	chr10:97204443-97204444
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10786210	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10882590	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10882592	0.85[CEU][hapmap];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10882599	1.00[CEU][hapmap];0.81[CHB][hapmap];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11188322	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11188324	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2148893	1.00[CEU][hapmap];0.82[CHB][hapmap];0.83[CHD][hapmap];0.87[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs59361612	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7089696	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[EUR][1000 genomes]
rs7094148	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]

No data

Chromatin state (count:65 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97169600-97204800	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr10:97171000-97208000	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr10:97185800-97205000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr10:97187200-97205400	Weak transcription	K562	blood
5	chr10:97189200-97205000	Weak transcription	Esophagus	oesophagus
6	chr10:97190200-97207200	Weak transcription	Colonic Mucosa	Colon
7	chr10:97190800-97208200	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr10:97191000-97204800	Weak transcription	Duodenum Mucosa	Duodenum
9	chr10:97193400-97210800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr10:97193800-97208000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr10:97195400-97204800	Weak transcription	Fetal Lung	lung
12	chr10:97195800-97204800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr10:97195800-97204800	Weak transcription	Spleen	Spleen
14	chr10:97195800-97205000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr10:97196000-97204600	Weak transcription	Adipose Nuclei	Adipose
16	chr10:97197400-97204600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
17	chr10:97197400-97204600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr10:97197400-97204600	Weak transcription	Brain Cingulate Gyrus	brain
19	chr10:97197400-97204800	Weak transcription	Brain Substantia Nigra	brain
20	chr10:97197400-97204800	Weak transcription	Rectal Mucosa Donor 29	rectum
21	chr10:97197400-97204800	Weak transcription	HSMMtube	muscle
22	chr10:97197600-97204600	Weak transcription	HUES6 Cell Line	embryonic stem cell
23	chr10:97197600-97204800	Weak transcription	HUES48 Cell Line	embryonic stem cell
24	chr10:97197600-97207400	Weak transcription	Brain Hippocampus Middle	brain
25	chr10:97197600-97207600	Weak transcription	Brain Germinal Matrix	brain
26	chr10:97197800-97204600	Weak transcription	Brain Inferior Temporal Lobe	brain
27	chr10:97198200-97204800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr10:97198400-97207600	Weak transcription	Fetal Brain Female	brain
29	chr10:97198800-97204600	Weak transcription	Lung	lung
30	chr10:97198800-97205800	Enhancers	Rectal Smooth Muscle	rectum
31	chr10:97199200-97204600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr10:97199600-97204600	Weak transcription	Cortex derived primary cultured neurospheres	brain
33	chr10:97200200-97208800	Enhancers	Colon Smooth Muscle	Colon
34	chr10:97200400-97204600	Weak transcription	Placenta	Placenta
35	chr10:97200400-97205200	Weak transcription	Fetal Intestine Small	intestine
36	chr10:97200800-97206800	Enhancers	HepG2	liver
37	chr10:97201200-97204800	Weak transcription	Right Atrium	heart
38	chr10:97201400-97204600	Weak transcription	Fetal Stomach	stomach
39	chr10:97201400-97207400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr10:97201600-97204600	Weak transcription	Duodenum Smooth Muscle	Duodenum
41	chr10:97201600-97204800	Weak transcription	Pancreas	Pancrea
42	chr10:97201600-97204800	Weak transcription	Sigmoid Colon	Sigmoid Colon
43	chr10:97201600-97204800	Weak transcription	Stomach Mucosa	stomach
44	chr10:97201600-97207400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
45	chr10:97202000-97204600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
46	chr10:97202400-97204600	Weak transcription	Aorta	Aorta
47	chr10:97202400-97204800	Weak transcription	Right Ventricle	heart
48	chr10:97202400-97205000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr10:97202400-97205800	Weak transcription	Fetal Intestine Large	intestine
50	chr10:97202800-97204800	Enhancers	Skeletal Muscle Male	skeletal muscle

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