Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10227372	0.85[CEU][hapmap]
rs10268039	0.85[CEU][hapmap]
rs10268330	0.85[CEU][hapmap]
rs1029597	0.83[JPT][hapmap]
rs11983051	0.85[CEU][hapmap];1.00[CHB][hapmap]
rs12164106	1.00[ASW][hapmap]
rs17145316	0.85[CEU][hapmap]
rs2072221	0.81[MEX][hapmap]
rs2214934	0.82[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs2906680	1.00[ASW][hapmap];0.85[CEU][hapmap];0.85[CHD][hapmap];0.88[GIH][hapmap];0.91[JPT][hapmap];1.00[LWK][hapmap];0.90[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs2906682	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap]
rs2906692	0.95[EUR][1000 genomes]
rs2906694	1.00[CEU][hapmap];0.82[JPT][hapmap];0.82[AFR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2965355	1.00[CEU][hapmap];0.80[CHD][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes]
rs2965356	1.00[CEU][hapmap];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2965357	0.84[CHD][hapmap]
rs4722054	0.85[CEU][hapmap]
rs6461598	0.82[CEU][hapmap];0.89[EUR][1000 genomes]
rs6979777	0.85[CEU][hapmap];0.91[EUR][1000 genomes]
rs7791639	0.85[CEU][hapmap]
rs886788	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs886789	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018133	chr7:21740118-22055283	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	nsv1016063	chr7:21740433-21808410	Active TSS Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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