Variant report

Variant rs2085588
Chromosome Location chr3:50854591-50854592
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50844400-50854600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr3:50845400-50854800 Weak transcription Placenta Placenta
3 chr3:50849800-50854600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:50852800-50854600 Enhancers HUES64 Cell Line embryonic stem cell
5 chr3:50852800-50855200 Enhancers iPS-18 Cell Line embryonic stem cell
6 chr3:50853000-50854600 Enhancers iPS-20b Cell Line embryonic stem cell
7 chr3:50853000-50855000 Enhancers iPS-15b Cell Line embryonic stem cell
8 chr3:50853000-50857200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr3:50853600-50855800 Weak transcription Brain Angular Gyrus brain
10 chr3:50853600-50856600 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr3:50853800-50856000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr3:50854000-50854600 Enhancers ES-I3 Cell Line embryonic stem cell
13 chr3:50854000-50857200 Enhancers H1 Cell Line embryonic stem cell
14 chr3:50854200-50854600 Enhancers HUES6 Cell Line embryonic stem cell
15 chr3:50854200-50854800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
16 chr3:50854200-50856400 Enhancers Placenta Amnion Placenta Amnion
17 chr3:50854400-50854600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr3:50854400-50855200 Enhancers H9 Cell Line embryonic stem cell
19 chr3:50854400-50856400 Flanking Active TSS HUES48 Cell Line embryonic stem cell

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