Variant report

Variant rs2061388
Chromosome Location chr3:50855461-50855462
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50853000-50857200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
2 chr3:50853600-50855800 Weak transcription Brain Angular Gyrus brain
3 chr3:50853600-50856600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr3:50853800-50856000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:50854000-50857200 Enhancers H1 Cell Line embryonic stem cell
6 chr3:50854200-50856400 Enhancers Placenta Amnion Placenta Amnion
7 chr3:50854400-50856400 Flanking Active TSS HUES48 Cell Line embryonic stem cell
8 chr3:50854800-50856200 Enhancers Placenta Placenta
9 chr3:50855000-50857000 Enhancers ES-I3 Cell Line embryonic stem cell
10 chr3:50855200-50855600 Weak transcription H9 Cell Line embryonic stem cell
11 chr3:50855200-50855800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr3:50855200-50856000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr3:50855200-50856000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
14 chr3:50855200-50856200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
15 chr3:50855200-50856400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr3:50855200-50856400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
17 chr3:50855200-50856600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
18 chr3:50855400-50855600 Flanking Active TSS HUES64 Cell Line embryonic stem cell
19 chr3:50855400-50855600 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
20 chr3:50855400-50856200 Enhancers Brain Cingulate Gyrus brain

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