Variant report

Variant rs34889917
Chromosome Location chr3:50628537-50628538
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50607800-50628600 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr3:50608200-50637400 Weak transcription Fetal Kidney kidney
3 chr3:50616000-50628600 Weak transcription Colon Smooth Muscle Colon
4 chr3:50620000-50628600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr3:50620400-50628600 Weak transcription Brain Anterior Caudate brain
6 chr3:50620400-50628600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr3:50620400-50628600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr3:50622400-50629800 Weak transcription Fetal Lung lung
9 chr3:50623000-50636600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr3:50623200-50633800 Enhancers Fetal Thymus thymus
11 chr3:50624400-50629600 Weak transcription Fetal Stomach stomach
12 chr3:50625200-50630600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr3:50626400-50629600 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr3:50626800-50629400 Enhancers HepG2 liver
15 chr3:50626800-50632400 Enhancers Liver Liver
16 chr3:50627200-50629800 Weak transcription Fetal Intestine Small intestine
17 chr3:50627600-50628800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr3:50627800-50628800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr3:50627800-50629000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
20 chr3:50627800-50630000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
21 chr3:50628000-50628600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr3:50628000-50628600 Flanking Active TSS Primary hematopoietic stem cells blood
23 chr3:50628000-50628600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
24 chr3:50628000-50628600 Active TSS Rectal Smooth Muscle rectum
25 chr3:50628000-50628600 Enhancers Thymus Thymus
26 chr3:50628000-50628800 Flanking Active TSS Primary B cells from cord blood blood
27 chr3:50628000-50628800 Flanking Active TSS Primary T cells from cord blood blood
28 chr3:50628000-50628800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
29 chr3:50628000-50628800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
30 chr3:50628000-50628800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
31 chr3:50628000-50628800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
32 chr3:50628000-50628800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
33 chr3:50628000-50628800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
34 chr3:50628000-50628800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
35 chr3:50628000-50628800 Flanking Active TSS GM12878-XiMat blood
36 chr3:50628000-50628800 Enhancers HMEC breast
37 chr3:50628000-50628800 Enhancers NHDF-Ad bronchial
38 chr3:50628000-50629000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr3:50628000-50629000 Flanking Active TSS Primary T cells fromperipheralblood blood
40 chr3:50628000-50629000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
41 chr3:50628000-50629000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
42 chr3:50628000-50629000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
43 chr3:50628000-50629000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
44 chr3:50628000-50629200 Flanking Active TSS Dnd41 blood
45 chr3:50628000-50629200 Flanking Active TSS K562 blood
46 chr3:50628000-50629400 Enhancers Psoas Muscle Psoas
47 chr3:50628000-50629400 Enhancers Right Atrium heart
48 chr3:50628000-50629400 Enhancers Right Ventricle heart
49 chr3:50628000-50630000 Enhancers Osteobl bone
50 chr3:50628000-50630400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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