Variant report

Variant	rs56837922
Chromosome Location	chr3:50877797-50877798
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs11130252	0.94[AFR][1000 genomes]
rs11130255	0.94[AFR][1000 genomes]
rs12185906	0.81[AFR][1000 genomes]
rs13062018	0.81[AFR][1000 genomes]
rs13064199	0.81[AFR][1000 genomes]
rs13065995	0.94[AFR][1000 genomes]
rs13072085	0.88[AFR][1000 genomes]
rs13075344	0.94[AFR][1000 genomes]
rs13075377	0.94[AFR][1000 genomes]
rs13079136	0.94[AFR][1000 genomes]
rs13079565	0.94[AFR][1000 genomes]
rs13084771	0.94[AFR][1000 genomes]
rs13085096	0.94[AFR][1000 genomes]
rs13085320	0.94[AFR][1000 genomes]
rs13085759	0.94[AFR][1000 genomes]
rs13085827	0.81[AFR][1000 genomes]
rs13086545	0.83[AFR][1000 genomes]
rs13086922	0.81[AFR][1000 genomes]
rs13088041	0.94[AFR][1000 genomes]
rs13088434	0.94[AFR][1000 genomes]
rs13088988	0.94[AFR][1000 genomes]
rs13089719	0.94[AFR][1000 genomes]
rs13092418	0.94[AFR][1000 genomes]
rs13093289	0.81[AFR][1000 genomes]
rs13093798	0.94[AFR][1000 genomes]
rs13094336	0.94[AFR][1000 genomes]
rs13095706	0.83[AFR][1000 genomes]
rs13095920	0.94[AFR][1000 genomes]
rs13096264	0.88[AFR][1000 genomes]
rs13096268	0.94[AFR][1000 genomes]
rs13096772	0.94[AFR][1000 genomes]
rs13097480	0.94[AFR][1000 genomes]
rs13099712	0.94[AFR][1000 genomes]
rs13100403	0.94[AFR][1000 genomes]
rs1379873	0.88[AFR][1000 genomes]
rs1379874	0.88[AFR][1000 genomes]
rs1379875	0.88[AFR][1000 genomes]
rs1458386	0.94[AFR][1000 genomes]
rs1458387	0.94[AFR][1000 genomes]
rs1463497	0.94[AFR][1000 genomes]
rs1531271	0.88[AFR][1000 genomes]
rs1563683	0.94[AFR][1000 genomes]
rs1598928	0.88[AFR][1000 genomes]
rs17660179	0.94[AFR][1000 genomes]
rs17660513	0.94[AFR][1000 genomes]
rs17787569	0.94[AFR][1000 genomes]
rs1824280	0.94[AFR][1000 genomes]
rs1841067	0.88[AFR][1000 genomes]
rs1902960	0.94[AFR][1000 genomes]
rs1947607	0.94[AFR][1000 genomes]
rs1966920	0.94[AFR][1000 genomes]
rs1975834	0.83[AFR][1000 genomes]
rs2045510	0.94[AFR][1000 genomes]
rs2045511	0.94[AFR][1000 genomes]
rs2061388	0.94[AFR][1000 genomes]
rs2085582	0.88[AFR][1000 genomes]
rs2085584	0.88[AFR][1000 genomes]
rs2085585	0.88[AFR][1000 genomes]
rs2085586	0.88[AFR][1000 genomes]
rs2085587	0.94[AFR][1000 genomes]
rs2125364	0.94[AFR][1000 genomes]
rs2125366	0.94[AFR][1000 genomes]
rs2125369	0.94[AFR][1000 genomes]
rs2168863	0.94[AFR][1000 genomes]
rs2168865	0.88[AFR][1000 genomes]
rs2168866	0.94[AFR][1000 genomes]
rs2199050	0.94[AFR][1000 genomes]
rs2219431	0.88[AFR][1000 genomes]
rs2219432	0.88[AFR][1000 genomes]
rs2227280	0.94[AFR][1000 genomes]
rs2232253	0.94[AFR][1000 genomes]
rs2262810	0.94[AFR][1000 genomes]
rs2269507	0.94[AFR][1000 genomes]
rs2355321	0.94[AFR][1000 genomes]
rs2355341	0.94[AFR][1000 genomes]
rs2355696	0.94[AFR][1000 genomes]
rs2608989	0.94[AFR][1000 genomes]
rs2608993	0.94[AFR][1000 genomes]
rs2608995	0.83[AFR][1000 genomes]
rs2608997	0.94[AFR][1000 genomes]
rs2608999	0.94[AFR][1000 genomes]
rs2609001	0.94[AFR][1000 genomes]
rs2609005	0.94[AFR][1000 genomes]
rs2609006	0.94[AFR][1000 genomes]
rs2609016	0.88[AFR][1000 genomes]
rs2609018	0.88[AFR][1000 genomes]
rs2609019	0.88[AFR][1000 genomes]
rs2609020	0.94[AFR][1000 genomes]
rs2609021	0.94[AFR][1000 genomes]
rs2609022	0.94[AFR][1000 genomes]
rs2609024	0.94[AFR][1000 genomes]
rs2609025	0.94[AFR][1000 genomes]
rs2609028	0.88[AFR][1000 genomes]
rs2609035	0.94[AFR][1000 genomes]
rs2609036	0.94[AFR][1000 genomes]
rs2609037	0.94[AFR][1000 genomes]
rs2675769	0.94[AFR][1000 genomes]
rs2675772	0.94[AFR][1000 genomes]
rs2675773	0.94[AFR][1000 genomes]
rs2675774	0.94[AFR][1000 genomes]
rs2675784	0.88[AFR][1000 genomes]
rs2675787	0.94[AFR][1000 genomes]
rs2675788	0.94[AFR][1000 genomes]
rs2675789	0.94[AFR][1000 genomes]
rs2675790	0.94[AFR][1000 genomes]
rs2675791	0.94[AFR][1000 genomes]
rs2675792	0.94[AFR][1000 genomes]
rs2675793	0.94[AFR][1000 genomes]
rs2675794	0.94[AFR][1000 genomes]
rs2675799	0.88[AFR][1000 genomes]
rs2675800	0.94[AFR][1000 genomes]
rs2675802	0.94[AFR][1000 genomes]
rs2675804	0.94[AFR][1000 genomes]
rs2675806	0.94[AFR][1000 genomes]
rs2675809	0.94[AFR][1000 genomes]
rs2675810	0.94[AFR][1000 genomes]
rs2675812	0.94[AFR][1000 genomes]
rs2675813	0.94[AFR][1000 genomes]
rs2675819	0.88[AFR][1000 genomes]
rs2675821	0.88[AFR][1000 genomes]
rs2675822	0.88[AFR][1000 genomes]
rs2675825	0.88[AFR][1000 genomes]
rs2675827	0.94[AFR][1000 genomes]
rs2675828	0.94[AFR][1000 genomes]
rs2675829	0.94[AFR][1000 genomes]
rs2675830	0.94[AFR][1000 genomes]
rs2675832	0.94[AFR][1000 genomes]
rs2675834	0.94[AFR][1000 genomes]
rs2675835	0.88[AFR][1000 genomes]
rs2675836	0.94[AFR][1000 genomes]
rs2675837	0.94[AFR][1000 genomes]
rs28762180	0.94[AFR][1000 genomes]
rs3101107	0.94[AFR][1000 genomes]
rs3106826	0.94[AFR][1000 genomes]
rs34002537	0.81[AFR][1000 genomes]
rs34006781	0.94[AFR][1000 genomes]
rs34040634	0.81[AFR][1000 genomes]
rs34048522	0.94[AFR][1000 genomes]
rs34075959	0.94[AFR][1000 genomes]
rs34184643	0.94[AFR][1000 genomes]
rs34202063	0.94[AFR][1000 genomes]
rs34266990	0.94[AFR][1000 genomes]
rs34307982	0.94[AFR][1000 genomes]
rs34320663	0.94[AFR][1000 genomes]
rs34390947	0.94[AFR][1000 genomes]
rs34399912	0.94[AFR][1000 genomes]
rs34456131	0.83[AFR][1000 genomes]
rs34481683	0.81[AFR][1000 genomes]
rs34492910	0.83[AFR][1000 genomes]
rs34576538	0.94[AFR][1000 genomes]
rs34584636	0.94[AFR][1000 genomes]
rs34628582	0.94[AFR][1000 genomes]
rs34632971	0.94[AFR][1000 genomes]
rs34640865	0.94[AFR][1000 genomes]
rs34773360	0.94[AFR][1000 genomes]
rs34786937	0.94[AFR][1000 genomes]
rs34836308	0.81[AFR][1000 genomes]
rs34846525	0.94[AFR][1000 genomes]
rs34855107	0.83[AFR][1000 genomes]
rs34866096	0.94[AFR][1000 genomes]
rs34889917	0.94[AFR][1000 genomes]
rs35082196	0.94[AFR][1000 genomes]
rs35098074	0.94[AFR][1000 genomes]
rs35121433	0.94[AFR][1000 genomes]
rs35122553	0.94[AFR][1000 genomes]
rs35140911	0.94[AFR][1000 genomes]
rs35150418	0.94[AFR][1000 genomes]
rs35170043	0.94[AFR][1000 genomes]
rs35190976	0.94[AFR][1000 genomes]
rs35273485	0.81[AFR][1000 genomes]
rs35429015	0.94[AFR][1000 genomes]
rs35481031	0.81[AFR][1000 genomes]
rs35492420	0.94[AFR][1000 genomes]
rs35499413	0.83[AFR][1000 genomes]
rs35531616	0.94[AFR][1000 genomes]
rs35566897	0.94[AFR][1000 genomes]
rs35655236	0.94[AFR][1000 genomes]
rs35690191	0.94[AFR][1000 genomes]
rs35693100	0.81[AFR][1000 genomes]
rs35842302	0.94[AFR][1000 genomes]
rs35875816	0.81[AFR][1000 genomes]
rs36011798	0.83[AFR][1000 genomes]
rs36018544	0.94[AFR][1000 genomes]
rs36056105	0.81[AFR][1000 genomes]
rs36057916	0.88[AFR][1000 genomes]
rs36110549	0.94[AFR][1000 genomes]
rs3804628	0.94[AFR][1000 genomes]
rs3940822	0.94[AFR][1000 genomes]
rs4131887	0.94[AFR][1000 genomes]
rs4429624	0.94[AFR][1000 genomes]
rs4452323	0.94[AFR][1000 genomes]
rs4688702	0.83[AFR][1000 genomes]
rs4688703	0.94[AFR][1000 genomes]
rs5000953	0.94[AFR][1000 genomes]
rs55785224	0.81[AFR][1000 genomes]
rs56337038	1.00[AMR][1000 genomes]
rs57378417	0.81[AFR][1000 genomes]
rs57642230	0.81[AFR][1000 genomes]
rs57732473	0.94[AFR][1000 genomes]
rs59769351	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59909173	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59914222	1.00[AMR][1000 genomes]
rs59949730	0.94[AFR][1000 genomes]
rs60292376	0.81[AFR][1000 genomes]
rs60898829	0.94[AFR][1000 genomes]
rs61142614	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61146736	1.00[AMR][1000 genomes]
rs61549968	0.94[AFR][1000 genomes]
rs61638760	0.81[AFR][1000 genomes]
rs6446215	0.94[AFR][1000 genomes]
rs66472954	0.88[AFR][1000 genomes]
rs66792086	0.87[AFR][1000 genomes]
rs66867590	0.94[AFR][1000 genomes]
rs67316637	0.94[AFR][1000 genomes]
rs67410403	0.94[AFR][1000 genomes]
rs67445615	0.81[AFR][1000 genomes]
rs67588094	0.94[AFR][1000 genomes]
rs6763779	0.87[AFR][1000 genomes]
rs67672341	0.88[AFR][1000 genomes]
rs6771085	0.81[AFR][1000 genomes]
rs6775012	0.94[AFR][1000 genomes]
rs67794896	0.94[AFR][1000 genomes]
rs67813889	0.94[AFR][1000 genomes]
rs67843425	0.94[AFR][1000 genomes]
rs6787521	0.94[AFR][1000 genomes]
rs67895930	0.94[AFR][1000 genomes]
rs6791880	0.94[AFR][1000 genomes]
rs68096338	0.94[AFR][1000 genomes]
rs68130118	0.94[AFR][1000 genomes]
rs68191286	0.94[AFR][1000 genomes]
rs71326944	0.94[AFR][1000 genomes]
rs71326945	0.88[AFR][1000 genomes]
rs71329007	0.94[AFR][1000 genomes]
rs71329008	0.88[AFR][1000 genomes]
rs71329014	0.88[AFR][1000 genomes]
rs71329021	0.94[AFR][1000 genomes]
rs71329023	0.88[AFR][1000 genomes]
rs73072418	0.94[AFR][1000 genomes]
rs73072438	0.94[AFR][1000 genomes]
rs73072442	0.94[AFR][1000 genomes]
rs73079191	0.94[AFR][1000 genomes]
rs73081114	0.94[AFR][1000 genomes]
rs73081144	0.94[AFR][1000 genomes]
rs73833888	0.94[AFR][1000 genomes]
rs73835540	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7426759	0.81[AFR][1000 genomes]
rs7429035	0.81[AFR][1000 genomes]
rs7623868	0.94[AFR][1000 genomes]
rs7623976	0.94[AFR][1000 genomes]
rs7629253	0.94[AFR][1000 genomes]
rs7629809	0.81[AFR][1000 genomes]
rs7650574	0.94[AFR][1000 genomes]
rs936405	0.94[AFR][1000 genomes]
rs936406	0.94[AFR][1000 genomes]
rs9839684	0.94[AFR][1000 genomes]

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv491647	chr3:50856276-51245158	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:50874200-50878600	Weak transcription	Brain Anterior Caudate	brain
2	chr3:50874200-50878800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr3:50876600-50877800	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr3:50876600-50878000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr3:50876600-50878600	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr3:50876600-50880200	Weak transcription	Brain Substantia Nigra	brain
7	chr3:50876800-50878400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr3:50876800-50878600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr3:50876800-50878600	Weak transcription	Brain Inferior Temporal Lobe	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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