The 2.0 version of rSNPBase

Variant report

Variant rs2355321
Chromosome Location chr3:50609808-50609809
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50607400-50615600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
2 chr3:50607400-50628200 Weak transcription Small Intestine intestine
3 chr3:50607600-50610400 Enhancers Primary T cells from cord blood blood
4 chr3:50607600-50613000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:50607600-50614400 Enhancers Primary T helper cells fromperipheralblood blood
6 chr3:50607600-50617600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr3:50607600-50628400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr3:50607800-50610600 Enhancers Duodenum Mucosa Duodenum
9 chr3:50607800-50611800 Enhancers Liver Liver
10 chr3:50607800-50612000 Weak transcription Ovary ovary
11 chr3:50607800-50614200 Weak transcription Brain Anterior Caudate brain
12 chr3:50607800-50614800 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr3:50607800-50615200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr3:50607800-50615200 Weak transcription Aorta Aorta
15 chr3:50607800-50620000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr3:50607800-50628200 Weak transcription HSMMtube muscle
17 chr3:50607800-50628600 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr3:50608000-50610200 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr3:50608000-50610200 Genic enhancers Fetal Stomach stomach
20 chr3:50608000-50610200 Weak transcription HSMM muscle
21 chr3:50608000-50610800 Weak transcription Brain Angular Gyrus brain
22 chr3:50608000-50610800 Transcr. at gene 5' and 3' Dnd41 blood
23 chr3:50608000-50611000 Enhancers Primary T regulatory cells fromperipheralblood blood
24 chr3:50608000-50613000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr3:50608000-50618400 Weak transcription NH-A brain
26 chr3:50608000-50621400 Weak transcription H1 Cell Line embryonic stem cell
27 chr3:50608000-50621400 Weak transcription HUVEC blood vessel
28 chr3:50608000-50621800 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr3:50608200-50610200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr3:50608200-50610600 Weak transcription Brain Cingulate Gyrus brain
31 chr3:50608200-50610800 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr3:50608200-50611400 Genic enhancers Fetal Intestine Small intestine
33 chr3:50608200-50611400 Weak transcription Osteobl bone
34 chr3:50608200-50612800 Weak transcription HMEC breast
35 chr3:50608200-50613800 Weak transcription Brain Substantia Nigra brain
36 chr3:50608200-50614000 Weak transcription Placenta Amnion Placenta Amnion
37 chr3:50608200-50614200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr3:50608200-50614400 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr3:50608200-50615200 Weak transcription Muscle Satellite Cultured Cells --
40 chr3:50608200-50616200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr3:50608200-50617400 Weak transcription Fetal Brain Male brain
42 chr3:50608200-50624000 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr3:50608200-50628400 Weak transcription A549 lung
44 chr3:50608200-50637400 Weak transcription Fetal Kidney kidney
45 chr3:50608400-50610000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr3:50608400-50610000 Weak transcription NHEK skin
47 chr3:50608400-50610200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr3:50608400-50610200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr3:50608400-50610200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
50 chr3:50608400-50610200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015