Variant report

Variant rs34399912
Chromosome Location chr3:50599491-50599492
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50583600-50603400 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr3:50587600-50603800 Weak transcription Brain Anterior Caudate brain
3 chr3:50588400-50603600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr3:50589600-50604000 Weak transcription Fetal Lung lung
5 chr3:50592800-50604000 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr3:50593400-50601400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr3:50593400-50602800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr3:50593600-50604000 Weak transcription Brain Cingulate Gyrus brain
9 chr3:50593800-50604200 Weak transcription Brain Germinal Matrix brain
10 chr3:50594200-50604000 Weak transcription Pancreas Pancrea
11 chr3:50594600-50604000 Weak transcription Brain Substantia Nigra brain
12 chr3:50594800-50601000 Weak transcription Fetal Brain Female brain
13 chr3:50594800-50604000 Weak transcription Adipose Nuclei Adipose
14 chr3:50595600-50604000 Weak transcription Brain Hippocampus Middle brain
15 chr3:50595800-50600000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr3:50595800-50603200 Strong transcription Fetal Stomach stomach
17 chr3:50595800-50604200 Weak transcription H9 Cell Line embryonic stem cell
18 chr3:50595800-50604400 Weak transcription Primary T cells from cord blood blood
19 chr3:50596200-50604200 Weak transcription Rectal Smooth Muscle rectum
20 chr3:50596400-50603800 Weak transcription Fetal Heart heart
21 chr3:50596600-50604000 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr3:50596800-50603200 Weak transcription Brain Angular Gyrus brain
23 chr3:50597000-50603000 Weak transcription Ovary ovary
24 chr3:50597000-50603800 Weak transcription Brain Inferior Temporal Lobe brain
25 chr3:50597000-50604000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr3:50597400-50602400 Weak transcription Fetal Intestine Small intestine
27 chr3:50597600-50599600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr3:50597600-50599800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr3:50597600-50600000 Weak transcription Osteobl bone
30 chr3:50597600-50600200 Weak transcription Muscle Satellite Cultured Cells --
31 chr3:50597600-50604200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr3:50597600-50604200 Weak transcription Gastric stomach
33 chr3:50597600-50604200 Weak transcription Right Atrium heart
34 chr3:50597800-50599800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr3:50597800-50599800 Weak transcription NHDF-Ad bronchial
36 chr3:50597800-50600000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr3:50597800-50601200 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr3:50597800-50601200 Weak transcription Right Ventricle heart
39 chr3:50597800-50604000 Weak transcription Left Ventricle heart
40 chr3:50598000-50603800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr3:50598200-50604000 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr3:50598400-50603800 Weak transcription Stomach Smooth Muscle stomach
43 chr3:50598600-50600200 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr3:50598600-50602400 Weak transcription Fetal Intestine Large intestine
45 chr3:50598600-50603000 Weak transcription Spleen Spleen
46 chr3:50598800-50601600 Weak transcription Fetal Muscle Leg muscle
47 chr3:50599000-50601400 Weak transcription Fetal Muscle Trunk muscle
48 chr3:50599000-50601600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr3:50599200-50599800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr3:50599200-50600000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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