Variant report

Variant rs2232253
Chromosome Location chr3:50617502-50617503
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50607400-50628200 Weak transcription Small Intestine intestine
2 chr3:50607600-50617600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr3:50607600-50628400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:50607800-50620000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr3:50607800-50628200 Weak transcription HSMMtube muscle
6 chr3:50607800-50628600 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr3:50608000-50618400 Weak transcription NH-A brain
8 chr3:50608000-50621400 Weak transcription H1 Cell Line embryonic stem cell
9 chr3:50608000-50621400 Weak transcription HUVEC blood vessel
10 chr3:50608000-50621800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr3:50608200-50624000 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr3:50608200-50628400 Weak transcription A549 lung
13 chr3:50608200-50637400 Weak transcription Fetal Kidney kidney
14 chr3:50608400-50625600 Weak transcription NHDF-Ad bronchial
15 chr3:50609200-50620800 Strong transcription Brain Germinal Matrix brain
16 chr3:50609800-50620600 Strong transcription Fetal Brain Female brain
17 chr3:50610000-50621400 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr3:50610000-50623000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr3:50610200-50618000 Strong transcription Fetal Adrenal Gland Adrenal Gland
20 chr3:50610200-50618800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr3:50610200-50620400 Strong transcription Brain Inferior Temporal Lobe brain
22 chr3:50610200-50623600 Strong transcription Fetal Muscle Leg muscle
23 chr3:50610200-50624400 Strong transcription Fetal Stomach stomach
24 chr3:50610200-50628000 Weak transcription Stomach Mucosa stomach
25 chr3:50610400-50618600 Weak transcription Right Atrium heart
26 chr3:50610400-50622400 Weak transcription GM12878-XiMat blood
27 chr3:50610400-50623200 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr3:50610400-50623200 Strong transcription Stomach Smooth Muscle stomach
29 chr3:50610400-50628400 Weak transcription HSMM muscle
30 chr3:50610600-50618200 Strong transcription Adipose Nuclei Adipose
31 chr3:50610600-50618400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr3:50610600-50627600 Weak transcription Primary hematopoietic stem cells blood
33 chr3:50610800-50618000 Weak transcription Fetal Heart heart
34 chr3:50610800-50618400 Weak transcription Psoas Muscle Psoas
35 chr3:50611000-50617600 Strong transcription Fetal Muscle Trunk muscle
36 chr3:50611000-50620600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr3:50611200-50618800 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr3:50611200-50621600 Strong transcription Thymus Thymus
39 chr3:50611400-50621600 Strong transcription Fetal Intestine Small intestine
40 chr3:50611600-50618000 Strong transcription Skeletal Muscle Male skeletal muscle
41 chr3:50611600-50618200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr3:50611600-50619200 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr3:50611800-50618400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr3:50612000-50617800 Strong transcription Ovary ovary
45 chr3:50612200-50621400 Strong transcription Fetal Intestine Large intestine
46 chr3:50612400-50620600 Strong transcription Spleen Spleen
47 chr3:50613000-50620000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr3:50613000-50620600 Strong transcription Rectal Mucosa Donor 29 rectum
49 chr3:50613000-50622400 Strong transcription Duodenum Mucosa Duodenum
50 chr3:50613400-50618000 Strong transcription Rectal Smooth Muscle rectum

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