Variant report

Variant rs13084476
Chromosome Location chr3:50555065-50555066
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50551600-50555200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:50551800-50557600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
3 chr3:50552200-50555200 Enhancers Fetal Heart heart
4 chr3:50552200-50555800 Enhancers Spleen Spleen
5 chr3:50552200-50556600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
6 chr3:50552200-50557600 Enhancers H1 Cell Line embryonic stem cell
7 chr3:50552400-50555200 Enhancers Placenta Placenta
8 chr3:50552600-50555200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
9 chr3:50552800-50555200 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr3:50553000-50557200 Enhancers Fetal Brain Female brain
11 chr3:50553600-50556600 Enhancers Fetal Brain Male brain
12 chr3:50553600-50556600 Enhancers Fetal Muscle Leg muscle
13 chr3:50553600-50556800 Enhancers Fetal Stomach stomach
14 chr3:50553800-50555200 Enhancers Skeletal Muscle Male skeletal muscle
15 chr3:50553800-50556000 Enhancers Fetal Adrenal Gland Adrenal Gland
16 chr3:50553800-50556800 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr3:50553800-50557000 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr3:50553800-50559000 Weak transcription Brain Anterior Caudate brain
19 chr3:50553800-50563000 Weak transcription K562 blood
20 chr3:50554000-50556000 Weak transcription Right Atrium heart
21 chr3:50554000-50557000 Enhancers Fetal Muscle Trunk muscle
22 chr3:50554200-50555200 Enhancers HUES64 Cell Line embryonic stem cell
23 chr3:50554200-50556600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr3:50554400-50555200 Enhancers iPS-20b Cell Line embryonic stem cell
25 chr3:50554400-50555200 Enhancers Fetal Intestine Large intestine
26 chr3:50554400-50555400 Enhancers HUES48 Cell Line embryonic stem cell
27 chr3:50554400-50555400 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr3:50554400-50555400 Enhancers Fetal Lung lung
29 chr3:50554400-50555800 Enhancers ES-WA7 Cell Line embryonic stem cell
30 chr3:50554400-50556000 Weak transcription Brain Germinal Matrix brain
31 chr3:50554400-50556600 Weak transcription Right Ventricle heart
32 chr3:50554400-50556800 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr3:50554400-50556800 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr3:50554400-50557400 Enhancers Fetal Intestine Small intestine
35 chr3:50554400-50558400 Enhancers HUES6 Cell Line embryonic stem cell
36 chr3:50554600-50555400 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr3:50554600-50555400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr3:50554600-50555400 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr3:50554600-50555800 Weak transcription Primary hematopoietic stem cells blood
40 chr3:50554600-50556800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr3:50554600-50557400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr3:50554600-50557600 Enhancers ES-I3 Cell Line embryonic stem cell
43 chr3:50554600-50559000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr3:50554600-50563200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr3:50554800-50556800 Weak transcription Primary B cells from peripheral blood blood
46 chr3:50554800-50560800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr3:50555000-50556600 Weak transcription H9 Cell Line embryonic stem cell
48 chr3:50555000-50558400 Weak transcription Left Ventricle heart

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