Variant report

Variant	rs417592
Chromosome Location	chr3:50610696-50610697
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr3:50609290-50610749	SK-N-SH	brain:	n/a	chr3:50609713-50609726 chr3:50609712-50609733 chr3:50609710-50609728 chr3:50609711-50609727 chr3:50609649-50609658 chr3:50609713-50609722
2	POLR2A	chr3:50610645-50610779	MCF-7	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:50606526..50611586-chr3:50612274..50616724,6	MCF-7	breast:
2	chr3:50599337..50613537-chr3:50634306..50660129,118	MCF-7	breast:
3	chr3:50607017..50612379-chr3:51423330..51426962,5	MCF-7	breast:
4	chr3:50608156..50612219-chr3:50612794..50616407,4	K562	blood:
5	chr3:50601756..50613871-chr3:50647072..50654542,28	K562	blood:
6	chr3:50609237..50610758-chr3:50651130..50652154,11	MCF-7	breast:
7	chr3:50605586..50608239-chr3:50609168..50611221,2	MCF-7	breast:

Variant related genes	Relation type
HEMK1	TF binding region
C3orf18	TF binding region
ENSG00000114737	Chromatin interaction
ENSG00000114738	Chromatin interaction
ENSG00000114735	Chromatin interaction
ENSG00000145050	Chromatin interaction

Extended variants
information (count: 117 )
Associated
traits (count: 5 )

rSNPs within LD-proxies of this variant (count:104)

rs_ID	r²[population]
rs1013233	0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs1034405	1.00[CEU][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs11130252	0.84[EUR][1000 genomes]
rs11712367	1.00[CHB][hapmap];0.98[CHD][hapmap];0.95[JPT][hapmap];0.84[LWK][hapmap];0.95[MEX][hapmap];0.81[MKK][hapmap];0.93[YRI][hapmap]
rs11716398	0.84[AMR][1000 genomes]
rs11719998	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12491425	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12493985	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12639126	0.80[CEU][hapmap]
rs129310	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13076850	0.89[EUR][1000 genomes]
rs13083004	0.89[EUR][1000 genomes]
rs13084476	0.84[EUR][1000 genomes]
rs13091933	0.94[CEU][hapmap];1.00[TSI][hapmap];0.85[EUR][1000 genomes]
rs13094336	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs13096772	0.81[CEU][hapmap]
rs1385025	1.00[CHB][hapmap];0.95[JPT][hapmap];0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs175634	0.94[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.94[GIH][hapmap];0.90[JPT][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17787569	1.00[CEU][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes]
rs1824281	1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[YRI][hapmap]
rs1971976	0.86[AMR][1000 genomes]
rs201193	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs201194	0.94[CEU][hapmap];1.00[TSI][hapmap];0.89[EUR][1000 genomes]
rs201196	0.91[EUR][1000 genomes]
rs201197	0.80[EUR][1000 genomes]
rs201198	1.00[CEU][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs2227280	0.90[EUR][1000 genomes]
rs2232248	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2232253	0.90[EUR][1000 genomes]
rs2269505	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.94[TSI][hapmap];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2269507	0.90[EUR][1000 genomes]
rs2355321	0.90[EUR][1000 genomes]
rs2355323	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2608988	0.86[TSI][hapmap]
rs2609024	0.86[TSI][hapmap]
rs2675773	0.87[CEU][hapmap]
rs2675810	0.86[TSI][hapmap]
rs2675816	0.82[CEU][hapmap]
rs34202063	0.90[EUR][1000 genomes]
rs34267788	0.81[EUR][1000 genomes]
rs34399912	0.90[EUR][1000 genomes]
rs34434811	0.81[EUR][1000 genomes]
rs34584636	1.00[CEU][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes]
rs34756253	0.84[EUR][1000 genomes]
rs34848480	0.86[AMR][1000 genomes]
rs34889917	0.90[EUR][1000 genomes]
rs35655236	0.89[EUR][1000 genomes]
rs35690191	0.89[EUR][1000 genomes]
rs35714264	0.85[EUR][1000 genomes]
rs35864641	0.81[EUR][1000 genomes]
rs375544	1.00[CHB][hapmap];0.98[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];0.86[TSI][hapmap];0.86[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs3792325	0.90[CHB][hapmap];0.90[JPT][hapmap];0.85[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs3792328	1.00[CHB][hapmap];0.98[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.82[MKK][hapmap];0.86[TSI][hapmap];0.85[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs3804627	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3804632	0.86[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs391620	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3943212	1.00[CHB][hapmap];0.95[JPT][hapmap];0.84[AMR][1000 genomes]
rs396302	0.95[CHB][hapmap];0.86[CHD][hapmap];0.81[GIH][hapmap];0.90[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];0.86[TSI][hapmap];0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs398703	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs399484	1.00[CEU][hapmap];0.87[TSI][hapmap];0.86[EUR][1000 genomes]
rs399971	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs414171	1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs441516	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs443030	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs443436	1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs448028	1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs4485709	1.00[CHB][hapmap];0.98[CHD][hapmap];0.95[JPT][hapmap];0.95[MEX][hapmap]
rs4533647	0.81[EUR][1000 genomes]
rs453570	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4688712	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs490634	0.94[CEU][hapmap];0.87[EUR][1000 genomes]
rs59949730	0.90[EUR][1000 genomes]
rs616589	0.90[CHB][hapmap];0.81[JPT][hapmap];0.85[AMR][1000 genomes]
rs622502	0.81[EUR][1000 genomes]
rs628081	0.94[CEU][hapmap];0.86[JPT][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6446212	1.00[CHB][hapmap];0.98[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap]
rs6446213	1.00[CHB][hapmap];0.98[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.89[YRI][hapmap]
rs67588094	0.90[EUR][1000 genomes]
rs6778680	0.82[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[YRI][hapmap]
rs6779819	1.00[CHB][hapmap];0.98[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.86[TSI][hapmap];0.89[YRI][hapmap];0.85[AMR][1000 genomes]
rs67813889	0.92[EUR][1000 genomes]
rs6784166	0.85[EUR][1000 genomes]
rs6787521	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs6791880	0.86[TSI][hapmap]
rs6796769	1.00[CHB][hapmap];0.98[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.86[TSI][hapmap];0.89[YRI][hapmap]
rs695170	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs71326937	0.90[EUR][1000 genomes]
rs728901	1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[AMR][1000 genomes]
rs750453	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs750510	0.89[CEU][hapmap];0.90[CHD][hapmap];0.83[GIH][hapmap];0.82[JPT][hapmap];0.87[MEX][hapmap];0.88[TSI][hapmap];0.89[EUR][1000 genomes]
rs751851	0.86[AMR][1000 genomes]
rs754298	0.81[CHD][hapmap];0.82[MEX][hapmap];0.82[EUR][1000 genomes]
rs7615703	1.00[CHB][hapmap];0.98[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.86[TSI][hapmap];0.93[YRI][hapmap]
rs7635666	0.84[AMR][1000 genomes]
rs7646236	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.80[YRI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs808149	0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs809451	0.81[EUR][1000 genomes]
rs809454	0.86[CHB][hapmap];0.95[JPT][hapmap];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs813243	1.00[CHB][hapmap];0.98[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];0.86[TSI][hapmap];0.86[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs900735	1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs9682401	1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9825535	0.95[CHB][hapmap];0.98[CHD][hapmap];0.95[JPT][hapmap];0.95[MEX][hapmap]
rs9826757	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9830920	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1821728	chr3:50156142-50657253	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
2	nsv1001993	chr3:50187646-50640808	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
3	esv3584502	chr3:50368278-50659741	Strong transcription Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
4	nsv432419	chr3:50388396-50637496	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
5	nsv1013225	chr3:50440826-50700448	Flanking Active TSS Enhancers Genic enhancers Weak transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
6	nsv536566	chr3:50440826-50700448	Genic enhancers Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
7	nsv984540	chr3:50473691-50669310	Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
8	nsv1012501	chr3:50483037-50679591	Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
9	nsv536567	chr3:50483037-50679591	Bivalent Enhancer Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
10	nsv460532	chr3:50536273-50616049	Bivalent Enhancer Genic enhancers Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	17 gene(s)	inside rSNPs	diseases
11	nsv590272	chr3:50536273-50616049	Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	17 gene(s)	inside rSNPs	diseases
12	nsv460533	chr3:50574213-50678151	Bivalent/Poised TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
13	nsv590273	chr3:50574213-50678151	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases

mRNA abundance (count:5)

SNP	Gene	Cis/trans	Tissue	Source
rs417592	HEMK1	cis	cerebellum	SCAN
rs417592	HEMK1	cis	parietal	SCAN
rs417592	MST1	cis	cerebellum	SCAN
rs417592	ALS2CL	cis	parietal	SCAN
rs417592	APEH	cis	cerebellum	SCAN

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:50607400-50615600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
2	chr3:50607400-50628200	Weak transcription	Small Intestine	intestine
3	chr3:50607600-50613000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr3:50607600-50614400	Enhancers	Primary T helper cells fromperipheralblood	blood
5	chr3:50607600-50617600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr3:50607600-50628400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr3:50607800-50611800	Enhancers	Liver	Liver
8	chr3:50607800-50612000	Weak transcription	Ovary	ovary
9	chr3:50607800-50614200	Weak transcription	Brain Anterior Caudate	brain
10	chr3:50607800-50614800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr3:50607800-50615200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr3:50607800-50615200	Weak transcription	Aorta	Aorta
13	chr3:50607800-50620000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr3:50607800-50628200	Weak transcription	HSMMtube	muscle
15	chr3:50607800-50628600	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr3:50608000-50610800	Weak transcription	Brain Angular Gyrus	brain
17	chr3:50608000-50610800	Transcr. at gene 5' and 3'	Dnd41	blood
18	chr3:50608000-50611000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
19	chr3:50608000-50613000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr3:50608000-50618400	Weak transcription	NH-A	brain
21	chr3:50608000-50621400	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr3:50608000-50621400	Weak transcription	HUVEC	blood vessel
23	chr3:50608000-50621800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
24	chr3:50608200-50610800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
25	chr3:50608200-50611400	Genic enhancers	Fetal Intestine Small	intestine
26	chr3:50608200-50611400	Weak transcription	Osteobl	bone
27	chr3:50608200-50612800	Weak transcription	HMEC	breast
28	chr3:50608200-50613800	Weak transcription	Brain Substantia Nigra	brain
29	chr3:50608200-50614000	Weak transcription	Placenta Amnion	Placenta Amnion
30	chr3:50608200-50614200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr3:50608200-50614400	Weak transcription	HUES6 Cell Line	embryonic stem cell
32	chr3:50608200-50615200	Weak transcription	Muscle Satellite Cultured Cells	--
33	chr3:50608200-50616200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
34	chr3:50608200-50617400	Weak transcription	Fetal Brain Male	brain
35	chr3:50608200-50624000	Weak transcription	HUES64 Cell Line	embryonic stem cell
36	chr3:50608200-50628400	Weak transcription	A549	lung
37	chr3:50608200-50637400	Weak transcription	Fetal Kidney	kidney
38	chr3:50608400-50611000	Genic enhancers	Fetal Muscle Trunk	muscle
39	chr3:50608400-50611000	Enhancers	Skeletal Muscle Female	skeletal muscle
40	chr3:50608400-50613000	Weak transcription	Rectal Mucosa Donor 29	rectum
41	chr3:50608400-50614800	Weak transcription	Duodenum Smooth Muscle	Duodenum
42	chr3:50608400-50615000	Weak transcription	H9 Cell Line	embryonic stem cell
43	chr3:50608400-50625600	Weak transcription	NHDF-Ad	bronchial
44	chr3:50608800-50614800	Genic enhancers	Placenta	Placenta
45	chr3:50609200-50620800	Strong transcription	Brain Germinal Matrix	brain
46	chr3:50609400-50612000	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr3:50609600-50611000	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells short term culture	blood
48	chr3:50609600-50611000	Genic enhancers	Pancreas	Pancrea
49	chr3:50609800-50610800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
50	chr3:50609800-50610800	Enhancers	Fetal Heart	heart

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